Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 MARK2P16-201ENST00000605714 1723 ntBASIC12.74□□□□□ -0.37
ATG4DQ86TL0 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 AL008707.1-201ENST00000422498 534 ntBASIC12.74□□□□□ -0.37
ATG4DQ86TL0 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 Z97180.1-201ENST00000445173 988 ntBASIC12.74□□□□□ -0.37
ATG4DQ86TL0 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 UPF3AP2-201ENST00000457924 1132 ntBASIC12.74□□□□□ -0.37
ATG4DQ86TL0 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 SLC25A15P3-201ENST00000505530 290 ntBASIC12.74□□□□□ -0.37
ATG4DQ86TL0 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 AC245884.6-201ENST00000515672 1067 ntBASIC12.74□□□□□ -0.37
ATG4DQ86TL0 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 AC090857.1-201ENST00000527400 390 ntBASIC12.74□□□□□ -0.37
ATG4DQ86TL0 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 AL021707.6-201ENST00000609212 491 ntBASIC12.74□□□□□ -0.37
ATG4DQ86TL0 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 AC091812.3-201ENST00000621362 345 ntBASIC12.74□□□□□ -0.37
ATG4DQ86TL0 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ATG4DQ86TL0 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 KRT8P43-201ENST00000406052 1458 ntBASIC12.73□□□□□ -0.37
ATG4DQ86TL0 AC004554.1-201ENST00000422830 1468 ntBASIC12.73□□□□□ -0.37
ATG4DQ86TL0 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.73□□□□□ -0.37
ATG4DQ86TL0 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms