Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 AL139008.1-201ENST00000437894 228 ntBASIC18.91■□□□□ 0.62
CGNL1Q0VF96 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 COX5A-205ENST00000568517 582 ntTSL 3 BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 AC021305.1-201ENST00000520656 1514 ntBASIC18.91■□□□□ 0.62
CGNL1Q0VF96 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC18.91■□□□□ 0.62
CGNL1Q0VF96 AL359881.3-201ENST00000602640 1721 ntBASIC18.9■□□□□ 0.62
CGNL1Q0VF96 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 AC089987.1-201ENST00000551654 2209 ntBASIC18.9■□□□□ 0.62
CGNL1Q0VF96 TNN-203ENST00000622870 3719 ntTSL 5 BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 AC106827.1-201ENST00000366454 431 ntBASIC18.9■□□□□ 0.62
CGNL1Q0VF96 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 RN7SL556P-201ENST00000582856 298 ntBASIC18.9■□□□□ 0.62
CGNL1Q0VF96 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 AC138466.4-201ENST00000623965 852 ntBASIC18.9■□□□□ 0.62
CGNL1Q0VF96 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CGNL1Q0VF96 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CGNL1Q0VF96 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CGNL1Q0VF96 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC18.89■□□□□ 0.61
CGNL1Q0VF96 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CGNL1Q0VF96 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC18.89■□□□□ 0.61
CGNL1Q0VF96 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CGNL1Q0VF96 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC18.89■□□□□ 0.61
CGNL1Q0VF96 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC18.89■□□□□ 0.61
CGNL1Q0VF96 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CGNL1Q0VF96 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC18.89■□□□□ 0.61
CGNL1Q0VF96 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC18.89■□□□□ 0.61
CGNL1Q0VF96 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CGNL1Q0VF96 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC18.89■□□□□ 0.61
CGNL1Q0VF96 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CGNL1Q0VF96 AF013593.1-201ENST00000458074 1487 ntBASIC18.89■□□□□ 0.61
CGNL1Q0VF96 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CGNL1Q0VF96 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CGNL1Q0VF96 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CGNL1Q0VF96 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC18.89■□□□□ 0.61
CGNL1Q0VF96 ABCD1P4-201ENST00000399687 604 ntBASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms