Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
EFNB1P98172 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
EFNB1P98172 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.52□□□□□ -0.4
EFNB1P98172 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
EFNB1P98172 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
EFNB1P98172 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.52□□□□□ -0.4
EFNB1P98172 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
EFNB1P98172 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
EFNB1P98172 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
EFNB1P98172 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.52□□□□□ -0.4
EFNB1P98172 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.52□□□□□ -0.4
EFNB1P98172 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
EFNB1P98172 AC012531.1-201ENST00000562848 2680 ntBASIC12.52□□□□□ -0.41
EFNB1P98172 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
EFNB1P98172 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB1P98172 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC12.52□□□□□ -0.41
EFNB1P98172 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC12.52□□□□□ -0.41
EFNB1P98172 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB1P98172 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC12.52□□□□□ -0.41
EFNB1P98172 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.52□□□□□ -0.41
EFNB1P98172 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB1P98172 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB1P98172 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.52□□□□□ -0.41
EFNB1P98172 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB1P98172 SSR4P1-201ENST00000415143 412 ntBASIC12.52□□□□□ -0.41
EFNB1P98172 AC079178.1-201ENST00000420915 656 ntBASIC12.52□□□□□ -0.41
EFNB1P98172 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.52□□□□□ -0.41
EFNB1P98172 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB1P98172 AC026954.1-201ENST00000429771 1293 ntBASIC12.52□□□□□ -0.41
EFNB1P98172 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.52□□□□□ -0.41
EFNB1P98172 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.52□□□□□ -0.41
EFNB1P98172 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
EFNB1P98172 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.52□□□□□ -0.41
EFNB1P98172 HLA-J-204ENST00000495278 958 ntBASIC12.52□□□□□ -0.41
EFNB1P98172 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.52□□□□□ -0.41
EFNB1P98172 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC12.52□□□□□ -0.41
EFNB1P98172 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.52□□□□□ -0.41
EFNB1P98172 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.52□□□□□ -0.41
EFNB1P98172 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.52□□□□□ -0.41
EFNB1P98172 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB1P98172 AC025048.6-201ENST00000634326 1161 ntBASIC12.52□□□□□ -0.41
EFNB1P98172 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB1P98172 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC12.52□□□□□ -0.41
EFNB1P98172 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
EFNB1P98172 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB1P98172 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.52□□□□□ -0.41
EFNB1P98172 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB1P98172 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.52□□□□□ -0.41
EFNB1P98172 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.52□□□□□ -0.41
EFNB1P98172 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB1P98172 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB1P98172 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB1P98172 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB1P98172 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB1P98172 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC12.52□□□□□ -0.41
EFNB1P98172 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
EFNB1P98172 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.52□□□□□ -0.41
EFNB1P98172 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC12.52□□□□□ -0.41
EFNB1P98172 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB1P98172 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC12.52□□□□□ -0.41
EFNB1P98172 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
EFNB1P98172 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB1P98172 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
EFNB1P98172 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC12.52□□□□□ -0.41
EFNB1P98172 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
EFNB1P98172 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
EFNB1P98172 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB1P98172 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB1P98172 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB1P98172 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC12.51□□□□□ -0.41
EFNB1P98172 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC12.51□□□□□ -0.41
EFNB1P98172 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
EFNB1P98172 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB1P98172 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB1P98172 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB1P98172 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC12.51□□□□□ -0.41
EFNB1P98172 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
EFNB1P98172 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.51□□□□□ -0.41
EFNB1P98172 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
EFNB1P98172 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC12.51□□□□□ -0.41
EFNB1P98172 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
EFNB1P98172 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.51□□□□□ -0.41
EFNB1P98172 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.51□□□□□ -0.41
EFNB1P98172 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB1P98172 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.51□□□□□ -0.41
EFNB1P98172 AL512384.1-201ENST00000406683 331 ntBASIC12.51□□□□□ -0.41
EFNB1P98172 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
EFNB1P98172 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
EFNB1P98172 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.51□□□□□ -0.41
EFNB1P98172 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.51□□□□□ -0.41
EFNB1P98172 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.51□□□□□ -0.41
EFNB1P98172 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.51□□□□□ -0.41
EFNB1P98172 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB1P98172 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.51□□□□□ -0.41
EFNB1P98172 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.51□□□□□ -0.41
EFNB1P98172 AC116345.2-201ENST00000512837 523 ntBASIC12.51□□□□□ -0.41
EFNB1P98172 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.51□□□□□ -0.41
EFNB1P98172 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
EFNB1P98172 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.51□□□□□ -0.41
EFNB1P98172 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms