Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AC087392.5-201ENST00000612517 489 ntBASIC14.11□□□□□ -0.15
AP1S1P61966 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.11□□□□□ -0.15
AP1S1P61966 AL161773.1-201ENST00000624845 863 ntBASIC14.11□□□□□ -0.15
AP1S1P61966 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S1P61966 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S1P61966 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
AP1S1P61966 ODCP-201ENST00000459650 1639 ntBASIC14.11□□□□□ -0.15
AP1S1P61966 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.11□□□□□ -0.15
AP1S1P61966 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC14.11□□□□□ -0.15
AP1S1P61966 PDXDC2P-206ENST00000534700 1315 ntBASIC14.11□□□□□ -0.15
AP1S1P61966 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S1P61966 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S1P61966 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S1P61966 AC015909.5-201ENST00000624336 2266 ntBASIC14.11□□□□□ -0.15
AP1S1P61966 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S1P61966 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP1S1P61966 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.11□□□□□ -0.15
AP1S1P61966 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC14.1□□□□□ -0.15
AP1S1P61966 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S1P61966 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.1□□□□□ -0.15
AP1S1P61966 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S1P61966 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
AP1S1P61966 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S1P61966 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.1□□□□□ -0.15
AP1S1P61966 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.1□□□□□ -0.15
AP1S1P61966 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.1□□□□□ -0.15
AP1S1P61966 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S1P61966 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S1P61966 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
AP1S1P61966 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S1P61966 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
AP1S1P61966 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S1P61966 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S1P61966 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S1P61966 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S1P61966 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S1P61966 SNORA50C-201ENST00000408535 133 ntBASIC14.1□□□□□ -0.15
AP1S1P61966 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S1P61966 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC14.1□□□□□ -0.15
AP1S1P61966 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.1□□□□□ -0.15
AP1S1P61966 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.1□□□□□ -0.15
AP1S1P61966 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC14.1□□□□□ -0.15
AP1S1P61966 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.1□□□□□ -0.15
AP1S1P61966 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.1□□□□□ -0.15
AP1S1P61966 AC007279.1-201ENST00000448547 837 ntBASIC14.1□□□□□ -0.15
AP1S1P61966 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC14.1□□□□□ -0.15
AP1S1P61966 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.1□□□□□ -0.15
AP1S1P61966 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
AP1S1P61966 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC14.1□□□□□ -0.15
AP1S1P61966 FOS-204ENST00000554617 796 ntTSL 2 BASIC14.1□□□□□ -0.15
AP1S1P61966 AC079328.1-201ENST00000560358 952 ntBASIC14.1□□□□□ -0.15
AP1S1P61966 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC14.1□□□□□ -0.15
AP1S1P61966 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC14.1□□□□□ -0.15
AP1S1P61966 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.1□□□□□ -0.15
AP1S1P61966 GARS-210ENST00000627489 324 ntTSL 4 BASIC14.1□□□□□ -0.15
AP1S1P61966 SNORA50.1-201ENST00000628590 135 ntBASIC14.1□□□□□ -0.15
AP1S1P61966 AC128714.1-201ENST00000637035 887 ntBASIC14.1□□□□□ -0.15
AP1S1P61966 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
AP1S1P61966 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S1P61966 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
AP1S1P61966 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
AP1S1P61966 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.1□□□□□ -0.15
AP1S1P61966 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S1P61966 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S1P61966 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S1P61966 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S1P61966 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
AP1S1P61966 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S1P61966 AC019109.1-201ENST00000401725 1874 ntBASIC14.1□□□□□ -0.15
AP1S1P61966 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.1□□□□□ -0.15
AP1S1P61966 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.1□□□□□ -0.15
AP1S1P61966 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
AP1S1P61966 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AP1S1P61966 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.1□□□□□ -0.15
AP1S1P61966 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.1□□□□□ -0.15
AP1S1P61966 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
AP1S1P61966 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S1P61966 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.09□□□□□ -0.15
AP1S1P61966 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S1P61966 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S1P61966 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.09□□□□□ -0.15
AP1S1P61966 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.09□□□□□ -0.15
AP1S1P61966 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S1P61966 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S1P61966 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S1P61966 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
AP1S1P61966 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S1P61966 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S1P61966 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
AP1S1P61966 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
AP1S1P61966 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC14.09□□□□□ -0.15
AP1S1P61966 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S1P61966 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP1S1P61966 AC092506.1-202ENST00000401022 528 ntBASIC14.09□□□□□ -0.15
AP1S1P61966 AC005722.1-201ENST00000431878 964 ntBASIC14.09□□□□□ -0.15
AP1S1P61966 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC14.09□□□□□ -0.15
AP1S1P61966 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC14.09□□□□□ -0.15
AP1S1P61966 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC14.09□□□□□ -0.15
AP1S1P61966 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.09□□□□□ -0.15
AP1S1P61966 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms