Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GFRA1P56159 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GFRA1P56159 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.54□□□□□ -0.4
GFRA1P56159 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GFRA1P56159 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
GFRA1P56159 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GFRA1P56159 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GFRA1P56159 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GFRA1P56159 IGF1-203ENST00000392904 761 ntTSL 5 BASIC12.54□□□□□ -0.4
GFRA1P56159 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC12.54□□□□□ -0.4
GFRA1P56159 AC005722.1-201ENST00000431878 964 ntBASIC12.54□□□□□ -0.4
GFRA1P56159 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC12.54□□□□□ -0.4
GFRA1P56159 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.54□□□□□ -0.4
GFRA1P56159 STK24P1-201ENST00000455035 1291 ntBASIC12.54□□□□□ -0.4
GFRA1P56159 AC018463.1-201ENST00000456674 917 ntBASIC12.54□□□□□ -0.4
GFRA1P56159 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC12.54□□□□□ -0.4
GFRA1P56159 RNA5SP406-201ENST00000516106 112 ntBASIC12.54□□□□□ -0.4
GFRA1P56159 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC12.54□□□□□ -0.4
GFRA1P56159 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC12.54□□□□□ -0.4
GFRA1P56159 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
GFRA1P56159 AC012073.1-201ENST00000606114 1108 ntBASIC12.54□□□□□ -0.4
GFRA1P56159 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
GFRA1P56159 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
GFRA1P56159 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.54□□□□□ -0.4
GFRA1P56159 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GFRA1P56159 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GFRA1P56159 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GFRA1P56159 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GFRA1P56159 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GFRA1P56159 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.54□□□□□ -0.4
GFRA1P56159 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
GFRA1P56159 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.54□□□□□ -0.4
GFRA1P56159 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
GFRA1P56159 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GFRA1P56159 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
GFRA1P56159 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GFRA1P56159 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GFRA1P56159 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GFRA1P56159 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
GFRA1P56159 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
GFRA1P56159 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.53□□□□□ -0.4
GFRA1P56159 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GFRA1P56159 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GFRA1P56159 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GFRA1P56159 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GFRA1P56159 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
GFRA1P56159 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC12.53□□□□□ -0.4
GFRA1P56159 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.53□□□□□ -0.4
GFRA1P56159 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
GFRA1P56159 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC12.53□□□□□ -0.4
GFRA1P56159 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.53□□□□□ -0.4
GFRA1P56159 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GFRA1P56159 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GFRA1P56159 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GFRA1P56159 MIR1307-201ENST00000408840 149 ntBASIC12.53□□□□□ -0.4
GFRA1P56159 RPL17P11-201ENST00000417593 544 ntBASIC12.53□□□□□ -0.4
GFRA1P56159 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.53□□□□□ -0.4
GFRA1P56159 AC007279.1-201ENST00000448547 837 ntBASIC12.53□□□□□ -0.4
GFRA1P56159 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.53□□□□□ -0.4
GFRA1P56159 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GFRA1P56159 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC12.53□□□□□ -0.4
GFRA1P56159 AC025186.1-201ENST00000478174 870 ntBASIC12.53□□□□□ -0.4
GFRA1P56159 RN7SL375P-201ENST00000492442 298 ntBASIC12.53□□□□□ -0.4
GFRA1P56159 PARP8-218ENST00000513738 596 ntTSL 4 BASIC12.53□□□□□ -0.4
GFRA1P56159 AP003398.1-201ENST00000531124 318 ntBASIC12.53□□□□□ -0.4
GFRA1P56159 AL132994.1-201ENST00000554098 400 ntBASIC12.53□□□□□ -0.4
GFRA1P56159 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC12.53□□□□□ -0.4
GFRA1P56159 MIR4326-201ENST00000582203 59 ntBASIC12.53□□□□□ -0.4
GFRA1P56159 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC12.53□□□□□ -0.4
GFRA1P56159 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
GFRA1P56159 AP003419.4-201ENST00000616071 517 ntBASIC12.53□□□□□ -0.4
GFRA1P56159 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.53□□□□□ -0.4
GFRA1P56159 MIR7845-201ENST00000618396 99 ntBASIC12.53□□□□□ -0.4
GFRA1P56159 SNX1-214ENST00000625244 324 ntTSL 5 BASIC12.53□□□□□ -0.4
GFRA1P56159 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.53□□□□□ -0.4
GFRA1P56159 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GFRA1P56159 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
GFRA1P56159 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GFRA1P56159 IL9RP3-201ENST00000442856 1674 ntBASIC12.53□□□□□ -0.4
GFRA1P56159 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
GFRA1P56159 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.53□□□□□ -0.4
GFRA1P56159 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC12.53□□□□□ -0.4
GFRA1P56159 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
GFRA1P56159 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GFRA1P56159 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GFRA1P56159 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
GFRA1P56159 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
GFRA1P56159 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.53□□□□□ -0.4
GFRA1P56159 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
GFRA1P56159 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GFRA1P56159 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
GFRA1P56159 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
GFRA1P56159 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
GFRA1P56159 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
GFRA1P56159 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.4
GFRA1P56159 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
GFRA1P56159 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
GFRA1P56159 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.52□□□□□ -0.4
GFRA1P56159 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
GFRA1P56159 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms