Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.5□□□□□ -0.41
LHX2P50458 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LHX2P50458 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LHX2P50458 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LHX2P50458 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LHX2P50458 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LHX2P50458 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LHX2P50458 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LHX2P50458 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
LHX2P50458 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LHX2P50458 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
LHX2P50458 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LHX2P50458 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LHX2P50458 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.49□□□□□ -0.41
LHX2P50458 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.49□□□□□ -0.41
LHX2P50458 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.49□□□□□ -0.41
LHX2P50458 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LHX2P50458 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.49□□□□□ -0.41
LHX2P50458 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.49□□□□□ -0.41
LHX2P50458 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LHX2P50458 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
LHX2P50458 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC12.49□□□□□ -0.41
LHX2P50458 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LHX2P50458 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LHX2P50458 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.49□□□□□ -0.41
LHX2P50458 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LHX2P50458 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LHX2P50458 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LHX2P50458 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
LHX2P50458 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
LHX2P50458 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LHX2P50458 AC004837.1-201ENST00000446267 564 ntBASIC12.49□□□□□ -0.41
LHX2P50458 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.49□□□□□ -0.41
LHX2P50458 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.49□□□□□ -0.41
LHX2P50458 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC12.49□□□□□ -0.41
LHX2P50458 AC025186.1-201ENST00000478174 870 ntBASIC12.49□□□□□ -0.41
LHX2P50458 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LHX2P50458 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC12.49□□□□□ -0.41
LHX2P50458 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC12.49□□□□□ -0.41
LHX2P50458 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
LHX2P50458 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LHX2P50458 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC12.49□□□□□ -0.41
LHX2P50458 KRT18P8-201ENST00000581937 1246 ntBASIC12.49□□□□□ -0.41
LHX2P50458 MIR4326-201ENST00000582203 59 ntBASIC12.49□□□□□ -0.41
LHX2P50458 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.49□□□□□ -0.41
LHX2P50458 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LHX2P50458 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
LHX2P50458 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LHX2P50458 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LHX2P50458 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LHX2P50458 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
LHX2P50458 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LHX2P50458 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LHX2P50458 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LHX2P50458 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LHX2P50458 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LHX2P50458 NRADDP-202ENST00000641269 1585 ntBASIC12.48□□□□□ -0.41
LHX2P50458 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
LHX2P50458 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.48□□□□□ -0.41
LHX2P50458 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LHX2P50458 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LHX2P50458 AC117503.4-201ENST00000623229 1418 ntBASIC12.48□□□□□ -0.41
LHX2P50458 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LHX2P50458 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.48□□□□□ -0.41
LHX2P50458 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.48□□□□□ -0.41
LHX2P50458 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LHX2P50458 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LHX2P50458 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LHX2P50458 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC12.48□□□□□ -0.41
LHX2P50458 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC12.48□□□□□ -0.41
LHX2P50458 AC253536.4-201ENST00000440539 267 ntBASIC12.48□□□□□ -0.41
LHX2P50458 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC12.48□□□□□ -0.41
LHX2P50458 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
LHX2P50458 AC093300.1-201ENST00000510368 1201 ntBASIC12.48□□□□□ -0.41
LHX2P50458 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC12.48□□□□□ -0.41
LHX2P50458 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC12.48□□□□□ -0.41
LHX2P50458 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LHX2P50458 BATF-202ENST00000555504 361 ntTSL 2 BASIC12.48□□□□□ -0.41
LHX2P50458 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC12.48□□□□□ -0.41
LHX2P50458 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC12.48□□□□□ -0.41
LHX2P50458 AP001065.2-201ENST00000617205 644 ntBASIC12.48□□□□□ -0.41
LHX2P50458 HELLS-212ENST00000630929 400 ntTSL 5 BASIC12.48□□□□□ -0.41
LHX2P50458 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LHX2P50458 AC011474.4-201ENST00000623523 2076 ntBASIC12.48□□□□□ -0.41
LHX2P50458 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
LHX2P50458 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LHX2P50458 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
LHX2P50458 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.48□□□□□ -0.41
LHX2P50458 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LHX2P50458 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LHX2P50458 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LHX2P50458 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LHX2P50458 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LHX2P50458 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
LHX2P50458 AC111170.3-201ENST00000624282 2464 ntBASIC12.48□□□□□ -0.41
LHX2P50458 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LHX2P50458 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LHX2P50458 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC12.48□□□□□ -0.41
LHX2P50458 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.48□□□□□ -0.41
LHX2P50458 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms