Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 SNIP1-201ENST00000296215 4605 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
UBE2AP49459 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
UBE2AP49459 USP17L6P-201ENST00000382470 1197 ntBASIC9.02□□□□□ -0.97
UBE2AP49459 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
UBE2AP49459 HNRNPA1P27-201ENST00000412087 955 ntBASIC9.02□□□□□ -0.97
UBE2AP49459 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC9.02□□□□□ -0.97
UBE2AP49459 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
UBE2AP49459 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC9.02□□□□□ -0.97
UBE2AP49459 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
UBE2AP49459 AP005018.1-201ENST00000525475 301 ntBASIC9.02□□□□□ -0.97
UBE2AP49459 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC9.02□□□□□ -0.97
UBE2AP49459 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
UBE2AP49459 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
UBE2AP49459 DRG2-220ENST00000583355 891 ntTSL 3 BASIC9.02□□□□□ -0.97
UBE2AP49459 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC9.02□□□□□ -0.97
UBE2AP49459 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
UBE2AP49459 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC9.02□□□□□ -0.97
UBE2AP49459 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
UBE2AP49459 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC9.02□□□□□ -0.97
UBE2AP49459 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
UBE2AP49459 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
UBE2AP49459 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
UBE2AP49459 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC9.02□□□□□ -0.97
UBE2AP49459 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
UBE2AP49459 RBM8A-204ENST00000583313 4961 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
UBE2AP49459 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
UBE2AP49459 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
UBE2AP49459 AL590440.2-201ENST00000641973 1595 ntBASIC9.02□□□□□ -0.97
UBE2AP49459 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC9.02□□□□□ -0.97
UBE2AP49459 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC9.02□□□□□ -0.97
UBE2AP49459 HDLBP-203ENST00000391975 6372 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
UBE2AP49459 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC9.02□□□□□ -0.97
UBE2AP49459 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
UBE2AP49459 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
UBE2AP49459 SETD7-201ENST00000274031 7365 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
UBE2AP49459 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
UBE2AP49459 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
UBE2AP49459 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
UBE2AP49459 PLEKHA6-202ENST00000414478 5091 ntTSL 5 BASIC9.02□□□□□ -0.97
UBE2AP49459 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
UBE2AP49459 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
UBE2AP49459 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
UBE2AP49459 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
UBE2AP49459 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
UBE2AP49459 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
UBE2AP49459 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
UBE2AP49459 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC9.01□□□□□ -0.97
UBE2AP49459 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC9.01□□□□□ -0.97
UBE2AP49459 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
UBE2AP49459 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
UBE2AP49459 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
UBE2AP49459 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
UBE2AP49459 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
UBE2AP49459 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
UBE2AP49459 AC089987.1-201ENST00000551654 2209 ntBASIC9.01□□□□□ -0.97
UBE2AP49459 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
UBE2AP49459 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC9.01□□□□□ -0.97
UBE2AP49459 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
UBE2AP49459 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
UBE2AP49459 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
UBE2AP49459 AC010422.6-201ENST00000593682 5857 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
UBE2AP49459 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
UBE2AP49459 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
UBE2AP49459 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
UBE2AP49459 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
UBE2AP49459 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC9.01□□□□□ -0.97
UBE2AP49459 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
UBE2AP49459 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
UBE2AP49459 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
UBE2AP49459 NDUFAB1P1-201ENST00000404262 460 ntBASIC9.01□□□□□ -0.97
UBE2AP49459 HIST1H2BPS3-201ENST00000419683 341 ntBASIC9.01□□□□□ -0.97
UBE2AP49459 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
UBE2AP49459 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
UBE2AP49459 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC9.01□□□□□ -0.97
UBE2AP49459 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
UBE2AP49459 KLF2P4-201ENST00000451959 1225 ntBASIC9.01□□□□□ -0.97
UBE2AP49459 CICP12-201ENST00000455801 843 ntBASIC9.01□□□□□ -0.97
UBE2AP49459 TAF8-206ENST00000472818 719 ntTSL 2 BASIC9.01□□□□□ -0.97
UBE2AP49459 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
UBE2AP49459 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC9.01□□□□□ -0.97
UBE2AP49459 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC9.01□□□□□ -0.97
UBE2AP49459 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC9.01□□□□□ -0.97
UBE2AP49459 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC9.01□□□□□ -0.97
UBE2AP49459 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC9.01□□□□□ -0.97
UBE2AP49459 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
UBE2AP49459 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC9.01□□□□□ -0.97
UBE2AP49459 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC9.01□□□□□ -0.97
UBE2AP49459 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
UBE2AP49459 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
UBE2AP49459 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC9.01□□□□□ -0.97
UBE2AP49459 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC9.01□□□□□ -0.97
UBE2AP49459 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC9.01□□□□□ -0.97
UBE2AP49459 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
UBE2AP49459 RPSAP52-203ENST00000622976 1023 ntBASIC9.01□□□□□ -0.97
UBE2AP49459 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
UBE2AP49459 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
UBE2AP49459 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
UBE2AP49459 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
UBE2AP49459 XRRA1-201ENST00000321448 4695 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
UBE2AP49459 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms