Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 CROCCP4-201ENST00000457096 498 ntBASIC12.89□□□□□ -0.35
CENPAP49450 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.89□□□□□ -0.35
CENPAP49450 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 BAP1-211ENST00000615113 489 ntBASIC12.89□□□□□ -0.35
CENPAP49450 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.89□□□□□ -0.35
CENPAP49450 RHOXF1P1-202ENST00000635473 501 ntBASIC12.89□□□□□ -0.35
CENPAP49450 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CENPAP49450 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
CENPAP49450 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.89□□□□□ -0.35
CENPAP49450 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.89□□□□□ -0.35
CENPAP49450 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC12.89□□□□□ -0.35
CENPAP49450 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CENPAP49450 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.89□□□□□ -0.35
CENPAP49450 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CENPAP49450 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CENPAP49450 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.88□□□□□ -0.35
CENPAP49450 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CENPAP49450 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.88□□□□□ -0.35
CENPAP49450 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.88□□□□□ -0.35
CENPAP49450 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
CENPAP49450 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
CENPAP49450 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 AC006001.1-201ENST00000325130 474 ntBASIC12.88□□□□□ -0.35
CENPAP49450 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.88□□□□□ -0.35
CENPAP49450 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.88□□□□□ -0.35
CENPAP49450 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CENPAP49450 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.88□□□□□ -0.35
CENPAP49450 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.88□□□□□ -0.35
CENPAP49450 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.88□□□□□ -0.35
CENPAP49450 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.88□□□□□ -0.35
CENPAP49450 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.88□□□□□ -0.35
CENPAP49450 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.88□□□□□ -0.35
CENPAP49450 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.88□□□□□ -0.35
CENPAP49450 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CENPAP49450 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CENPAP49450 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.88□□□□□ -0.35
CENPAP49450 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.88□□□□□ -0.35
CENPAP49450 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CENPAP49450 DRC7-202ENST00000360716 3041 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.88□□□□□ -0.35
CENPAP49450 AP001972.5-201ENST00000624624 2338 ntBASIC12.88□□□□□ -0.35
CENPAP49450 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CENPAP49450 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CENPAP49450 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.88□□□□□ -0.35
CENPAP49450 TNRC18P1-201ENST00000502875 3650 ntBASIC12.87□□□□□ -0.35
CENPAP49450 RNF125-201ENST00000217740 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CENPAP49450 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CENPAP49450 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CENPAP49450 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CENPAP49450 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CENPAP49450 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.87□□□□□ -0.35
CENPAP49450 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.87□□□□□ -0.35
CENPAP49450 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
CENPAP49450 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.87□□□□□ -0.35
CENPAP49450 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms