Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
PCP4P48539 NOP2-202ENST00000382421 2736 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
PCP4P48539 FAT4-201ENST00000335110 9669 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
PCP4P48539 NEK1-206ENST00000510533 5377 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
PCP4P48539 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC8.97□□□□□ -0.97
PCP4P48539 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC8.97□□□□□ -0.97
PCP4P48539 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC8.97□□□□□ -0.97
PCP4P48539 ZNF597-201ENST00000301744 5513 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PCP4P48539 CD44-209ENST00000433892 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
PCP4P48539 BX005040.3-201ENST00000611332 1988 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
PCP4P48539 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC8.97□□□□□ -0.97
PCP4P48539 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PCP4P48539 IL9RP3-201ENST00000442856 1674 ntBASIC8.97□□□□□ -0.97
PCP4P48539 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PCP4P48539 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PCP4P48539 MNAT1-201ENST00000261245 2635 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PCP4P48539 NSL1-202ENST00000366977 2317 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PCP4P48539 CECR2-204ENST00000400585 4833 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
PCP4P48539 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
PCP4P48539 NELL2-203ENST00000429094 3612 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PCP4P48539 PPP1R12A-202ENST00000437004 4639 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
PCP4P48539 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
PCP4P48539 MAPK10-205ENST00000395160 2448 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
PCP4P48539 GDPD2-202ENST00000453994 2438 ntTSL 2 BASIC8.96□□□□□ -0.97
PCP4P48539 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.97
PCP4P48539 GTF3C1-202ENST00000561623 7015 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
PCP4P48539 AC093690.1-201ENST00000418963 2110 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
PCP4P48539 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC8.96□□□□□ -0.97
PCP4P48539 LYSMD1-201ENST00000368908 2479 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
PCP4P48539 VTA1-203ENST00000452973 3177 ntTSL 2 BASIC8.96□□□□□ -0.97
PCP4P48539 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC8.96□□□□□ -0.97
PCP4P48539 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
PCP4P48539 MMP19-201ENST00000322569 2229 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
PCP4P48539 SCG2-201ENST00000305409 2576 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
PCP4P48539 RFX4-202ENST00000357881 2565 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
PCP4P48539 HSP90AB1-203ENST00000371646 2572 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
PCP4P48539 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC8.96□□□□□ -0.97
PCP4P48539 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC8.96□□□□□ -0.97
PCP4P48539 AC106865.1-202ENST00000507055 2292 ntBASIC8.96□□□□□ -0.97
PCP4P48539 C8B-205ENST00000535057 2289 ntTSL 2 BASIC8.96□□□□□ -0.97
PCP4P48539 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC8.96□□□□□ -0.97
PCP4P48539 SCN5A-204ENST00000414099 8303 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
PCP4P48539 ENPEP-201ENST00000265162 6943 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
PCP4P48539 EXOC7-220ENST00000607838 3353 ntTSL 5 BASIC8.96□□□□□ -0.97
PCP4P48539 IP6K1-209ENST00000613416 4806 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
PCP4P48539 LINC01588-208ENST00000554129 2301 ntTSL 2 BASIC8.96□□□□□ -0.97
PCP4P48539 SFXN5-201ENST00000272433 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
PCP4P48539 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
PCP4P48539 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
PCP4P48539 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
PCP4P48539 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC8.96□□□□□ -0.98
PCP4P48539 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
PCP4P48539 VMO1-204ENST00000441199 741 ntTSL 2 BASIC8.96□□□□□ -0.98
PCP4P48539 AL160286.2-201ENST00000567150 934 ntBASIC8.96□□□□□ -0.98
PCP4P48539 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC8.96□□□□□ -0.98
PCP4P48539 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC8.96□□□□□ -0.98
PCP4P48539 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC8.96□□□□□ -0.98
PCP4P48539 SNRNP200-201ENST00000323853 7165 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
PCP4P48539 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.98
PCP4P48539 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC8.96□□□□□ -0.98
PCP4P48539 BHLHB9-204ENST00000448867 3936 ntAPPRIS P1 TSL 4 BASIC8.96□□□□□ -0.98
PCP4P48539 RCAN1-207ENST00000481448 2816 ntTSL 5 BASIC8.96□□□□□ -0.98
PCP4P48539 DDX23-201ENST00000308025 3248 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
PCP4P48539 C1orf131-201ENST00000318906 2483 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
PCP4P48539 CHRDL2-201ENST00000263671 1712 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
PCP4P48539 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
PCP4P48539 PPP1R3C-201ENST00000238994 2524 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
PCP4P48539 CSPG4P4Y-201ENST00000333235 3724 ntBASIC8.96□□□□□ -0.98
PCP4P48539 CSPG4P3Y-201ENST00000418188 3724 ntBASIC8.96□□□□□ -0.98
PCP4P48539 OLFML3-201ENST00000320334 1780 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
PCP4P48539 PAX6-245ENST00000638914 7300 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.98
PCP4P48539 CEACAM22P-201ENST00000446628 3016 ntTSL 2 BASIC8.96□□□□□ -0.98
PCP4P48539 NTRK3-208ENST00000557856 2622 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
PCP4P48539 LINC01343-201ENST00000431311 2283 ntTSL 3 BASIC8.96□□□□□ -0.98
PCP4P48539 WDR93-205ENST00000560294 2293 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.98
PCP4P48539 RALBP1-201ENST00000019317 4368 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
PCP4P48539 CLEC4M-205ENST00000394122 1898 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
PCP4P48539 ADAMTSL3-205ENST00000567476 6873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
PCP4P48539 AC008060.4-201ENST00000569431 1861 ntBASIC8.96□□□□□ -0.98
PCP4P48539 PIPSL-202ENST00000489875 2733 ntBASIC8.96□□□□□ -0.98
PCP4P48539 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
PCP4P48539 IER3IP1-201ENST00000256433 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PCP4P48539 ZNF418-201ENST00000396147 3694 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
PCP4P48539 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC8.95□□□□□ -0.98
PCP4P48539 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC8.95□□□□□ -0.98
PCP4P48539 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC8.95□□□□□ -0.98
PCP4P48539 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC8.95□□□□□ -0.98
PCP4P48539 NLRP12-204ENST00000391773 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
PCP4P48539 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
PCP4P48539 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC8.95□□□□□ -0.98
PCP4P48539 IL17RB-201ENST00000288167 2010 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PCP4P48539 NOL6-204ENST00000379471 3843 ntTSL 5 BASIC8.95□□□□□ -0.98
PCP4P48539 AL356750.1-201ENST00000623911 2496 ntBASIC8.95□□□□□ -0.98
PCP4P48539 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
PCP4P48539 SMARCAL1-202ENST00000358207 3056 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
PCP4P48539 NEFM-201ENST00000221166 4020 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
PCP4P48539 SNAI1-201ENST00000244050 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PCP4P48539 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC8.95□□□□□ -0.98
PCP4P48539 SEC14L1P1-201ENST00000534767 2181 ntBASIC8.95□□□□□ -0.98
PCP4P48539 TRIM39-204ENST00000396548 3198 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms