Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.67□□□□□ -0.38
ATRXP46100 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATRXP46100 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
ATRXP46100 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
ATRXP46100 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
ATRXP46100 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATRXP46100 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
ATRXP46100 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
ATRXP46100 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.67□□□□□ -0.38
ATRXP46100 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ATRXP46100 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
ATRXP46100 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATRXP46100 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATRXP46100 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.67□□□□□ -0.38
ATRXP46100 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC12.67□□□□□ -0.38
ATRXP46100 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATRXP46100 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATRXP46100 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
ATRXP46100 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ATRXP46100 SYNGR4-201ENST00000344846 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATRXP46100 FAM96A-202ENST00000380290 826 ntTSL 2 BASIC12.67□□□□□ -0.38
ATRXP46100 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ATRXP46100 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
ATRXP46100 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC12.67□□□□□ -0.38
ATRXP46100 DNM1P46-202ENST00000415963 882 ntBASIC12.67□□□□□ -0.38
ATRXP46100 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC12.67□□□□□ -0.38
ATRXP46100 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.67□□□□□ -0.38
ATRXP46100 SNHG11-211ENST00000444816 621 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ATRXP46100 SNHG11-214ENST00000457218 880 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ATRXP46100 RN7SL477P-201ENST00000488440 286 ntBASIC12.67□□□□□ -0.38
ATRXP46100 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC12.67□□□□□ -0.38
ATRXP46100 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC12.67□□□□□ -0.38
ATRXP46100 PDLIM2-218ENST00000614502 599 ntTSL 2 BASIC12.67□□□□□ -0.38
ATRXP46100 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC12.67□□□□□ -0.38
ATRXP46100 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATRXP46100 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ATRXP46100 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ATRXP46100 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ATRXP46100 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
ATRXP46100 CHIAP2-204ENST00000532686 1449 ntBASIC12.67□□□□□ -0.38
ATRXP46100 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.67□□□□□ -0.38
ATRXP46100 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.67□□□□□ -0.38
ATRXP46100 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.67□□□□□ -0.38
ATRXP46100 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC12.67□□□□□ -0.38
ATRXP46100 PPP4R1L-201ENST00000244070 1474 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ATRXP46100 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.66□□□□□ -0.38
ATRXP46100 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.66□□□□□ -0.38
ATRXP46100 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
ATRXP46100 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATRXP46100 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ATRXP46100 CDA-201ENST00000375071 963 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATRXP46100 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.66□□□□□ -0.38
ATRXP46100 RN7SL479P-201ENST00000472003 300 ntBASIC12.66□□□□□ -0.38
ATRXP46100 MOG-229ENST00000483013 279 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ATRXP46100 MOG-232ENST00000490427 327 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ATRXP46100 CD44-224ENST00000526669 870 ntTSL 5 BASIC12.66□□□□□ -0.38
ATRXP46100 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC12.66□□□□□ -0.38
ATRXP46100 AC010202.1-201ENST00000551181 405 ntBASIC12.66□□□□□ -0.38
ATRXP46100 AC109460.2-202ENST00000568057 573 ntTSL 3 BASIC12.66□□□□□ -0.38
ATRXP46100 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
ATRXP46100 AC123912.6-201ENST00000612657 315 ntBASIC12.66□□□□□ -0.38
ATRXP46100 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC12.66□□□□□ -0.38
ATRXP46100 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATRXP46100 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATRXP46100 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ATRXP46100 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
ATRXP46100 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATRXP46100 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.66□□□□□ -0.38
ATRXP46100 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATRXP46100 LINC00877-207ENST00000488545 1561 ntTSL 3 BASIC12.66□□□□□ -0.38
ATRXP46100 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
ATRXP46100 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATRXP46100 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
ATRXP46100 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC12.66□□□□□ -0.38
ATRXP46100 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.66□□□□□ -0.38
ATRXP46100 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.66□□□□□ -0.38
ATRXP46100 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATRXP46100 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATRXP46100 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC12.66□□□□□ -0.38
ATRXP46100 RBP4-203ENST00000371469 814 ntTSL 5 BASIC12.66□□□□□ -0.38
ATRXP46100 SNORD88B-201ENST00000408454 91 ntBASIC12.66□□□□□ -0.38
ATRXP46100 AC079742.1-201ENST00000434951 357 ntTSL 3 BASIC12.66□□□□□ -0.38
ATRXP46100 AC253536.1-201ENST00000437021 315 ntBASIC12.66□□□□□ -0.38
ATRXP46100 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC12.66□□□□□ -0.38
ATRXP46100 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC12.66□□□□□ -0.38
ATRXP46100 AL136360.2-201ENST00000502636 581 ntTSL 4 BASIC12.66□□□□□ -0.38
ATRXP46100 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC12.66□□□□□ -0.38
ATRXP46100 LINC01615-203ENST00000634877 673 ntTSL 5 BASIC12.66□□□□□ -0.38
ATRXP46100 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
ATRXP46100 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATRXP46100 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.66□□□□□ -0.38
ATRXP46100 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.66□□□□□ -0.38
ATRXP46100 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
ATRXP46100 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
ATRXP46100 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
ATRXP46100 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATRXP46100 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ATRXP46100 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ATRXP46100 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ATRXP46100 TMPO-212ENST00000556029 4242 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms