Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.07■□□□□ 0.32
PDE6BP35913 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6BP35913 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6BP35913 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
PDE6BP35913 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6BP35913 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6BP35913 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.07■□□□□ 0.32
PDE6BP35913 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6BP35913 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6BP35913 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6BP35913 FDPSP7-201ENST00000429043 1054 ntBASIC17.07■□□□□ 0.32
PDE6BP35913 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC17.07■□□□□ 0.32
PDE6BP35913 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC17.07■□□□□ 0.32
PDE6BP35913 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6BP35913 RN7SL523P-201ENST00000484401 298 ntBASIC17.07■□□□□ 0.32
PDE6BP35913 PHBP18-201ENST00000546648 813 ntBASIC17.07■□□□□ 0.32
PDE6BP35913 PRR20FP-201ENST00000603320 180 ntBASIC17.07■□□□□ 0.32
PDE6BP35913 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
PDE6BP35913 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6BP35913 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6BP35913 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6BP35913 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PDE6BP35913 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PDE6BP35913 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC17.07■□□□□ 0.32
PDE6BP35913 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6BP35913 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
PDE6BP35913 PCDHA3-202ENST00000532566 4594 ntBASIC17.07■□□□□ 0.32
PDE6BP35913 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6BP35913 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6BP35913 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.07■□□□□ 0.32
PDE6BP35913 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC17.07■□□□□ 0.32
PDE6BP35913 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6BP35913 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.07■□□□□ 0.32
PDE6BP35913 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PDE6BP35913 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6BP35913 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
PDE6BP35913 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.06■□□□□ 0.32
PDE6BP35913 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6BP35913 HSPA8P5-201ENST00000456928 2069 ntBASIC17.06■□□□□ 0.32
PDE6BP35913 KRT8P38-201ENST00000441370 1430 ntBASIC17.06■□□□□ 0.32
PDE6BP35913 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PDE6BP35913 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6BP35913 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC17.06■□□□□ 0.32
PDE6BP35913 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.06■□□□□ 0.32
PDE6BP35913 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC17.06■□□□□ 0.32
PDE6BP35913 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PDE6BP35913 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6BP35913 FAM197Y6-201ENST00000420524 766 ntBASIC17.06■□□□□ 0.32
PDE6BP35913 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC17.06■□□□□ 0.32
PDE6BP35913 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC17.06■□□□□ 0.32
PDE6BP35913 AC010900.1-201ENST00000449849 1296 ntBASIC17.06■□□□□ 0.32
PDE6BP35913 AC011431.1-201ENST00000512971 230 ntBASIC17.06■□□□□ 0.32
PDE6BP35913 RNA5SP420-201ENST00000516997 137 ntBASIC17.06■□□□□ 0.32
PDE6BP35913 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC17.06■□□□□ 0.32
PDE6BP35913 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC17.06■□□□□ 0.32
PDE6BP35913 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC17.06■□□□□ 0.32
PDE6BP35913 INO80E-209ENST00000567254 625 ntTSL 2 BASIC17.06■□□□□ 0.32
PDE6BP35913 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC17.06■□□□□ 0.32
PDE6BP35913 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC17.06■□□□□ 0.32
PDE6BP35913 AC123912.6-201ENST00000612657 315 ntBASIC17.06■□□□□ 0.32
PDE6BP35913 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PDE6BP35913 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC17.06■□□□□ 0.32
PDE6BP35913 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6BP35913 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6BP35913 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.06■□□□□ 0.32
PDE6BP35913 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6BP35913 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6BP35913 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6BP35913 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC17.06■□□□□ 0.32
PDE6BP35913 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6BP35913 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6BP35913 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6BP35913 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6BP35913 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PDE6BP35913 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6BP35913 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6BP35913 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6BP35913 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6BP35913 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6BP35913 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.05■□□□□ 0.32
PDE6BP35913 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6BP35913 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC17.05■□□□□ 0.32
PDE6BP35913 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6BP35913 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6BP35913 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6BP35913 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
PDE6BP35913 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6BP35913 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6BP35913 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6BP35913 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PDE6BP35913 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC17.05■□□□□ 0.32
PDE6BP35913 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
PDE6BP35913 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6BP35913 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6BP35913 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PDE6BP35913 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6BP35913 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6BP35913 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6BP35913 MIR339-201ENST00000362153 94 ntBASIC17.05■□□□□ 0.32
PDE6BP35913 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms