Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CCL1P22362 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.08□□□□□ -0.48
CCL1P22362 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.08□□□□□ -0.48
CCL1P22362 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCL1P22362 KRT8P43-201ENST00000406052 1458 ntBASIC12.08□□□□□ -0.48
CCL1P22362 KRT8P21-201ENST00000430398 1491 ntBASIC12.08□□□□□ -0.48
CCL1P22362 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CCL1P22362 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCL1P22362 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.08□□□□□ -0.48
CCL1P22362 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.08□□□□□ -0.48
CCL1P22362 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CCL1P22362 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.08□□□□□ -0.48
CCL1P22362 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.07□□□□□ -0.48
CCL1P22362 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCL1P22362 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCL1P22362 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.07□□□□□ -0.48
CCL1P22362 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCL1P22362 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CCL1P22362 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCL1P22362 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCL1P22362 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCL1P22362 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCL1P22362 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CCL1P22362 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.07□□□□□ -0.48
CCL1P22362 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CCL1P22362 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CCL1P22362 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCL1P22362 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
CCL1P22362 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCL1P22362 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.07□□□□□ -0.48
CCL1P22362 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CCL1P22362 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
CCL1P22362 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCL1P22362 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CCL1P22362 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
CCL1P22362 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CCL1P22362 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.07□□□□□ -0.48
CCL1P22362 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCL1P22362 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.07□□□□□ -0.48
CCL1P22362 TUBB2BP1-201ENST00000404155 871 ntBASIC12.07□□□□□ -0.48
CCL1P22362 AC005034.1-201ENST00000426657 489 ntBASIC12.07□□□□□ -0.48
CCL1P22362 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.07□□□□□ -0.48
CCL1P22362 AC007279.1-201ENST00000448547 837 ntBASIC12.07□□□□□ -0.48
CCL1P22362 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CCL1P22362 BNIP3P42-201ENST00000454982 569 ntBASIC12.07□□□□□ -0.48
CCL1P22362 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CCL1P22362 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.07□□□□□ -0.48
CCL1P22362 AC005740.2-201ENST00000511085 419 ntBASIC12.07□□□□□ -0.48
CCL1P22362 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.07□□□□□ -0.48
CCL1P22362 AC126915.1-201ENST00000522847 1038 ntBASIC12.07□□□□□ -0.48
CCL1P22362 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.07□□□□□ -0.48
CCL1P22362 MIR3940-201ENST00000579148 102 ntBASIC12.07□□□□□ -0.48
CCL1P22362 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC12.07□□□□□ -0.48
CCL1P22362 BNIP3P29-201ENST00000598302 571 ntBASIC12.07□□□□□ -0.48
CCL1P22362 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.07□□□□□ -0.48
CCL1P22362 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
CCL1P22362 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.07□□□□□ -0.48
CCL1P22362 AC011447.5-201ENST00000616168 564 ntBASIC12.07□□□□□ -0.48
CCL1P22362 AL035252.4-201ENST00000624174 288 ntBASIC12.07□□□□□ -0.48
CCL1P22362 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.07□□□□□ -0.48
CCL1P22362 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCL1P22362 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCL1P22362 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
CCL1P22362 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.07□□□□□ -0.48
CCL1P22362 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.07□□□□□ -0.48
CCL1P22362 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCL1P22362 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCL1P22362 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCL1P22362 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCL1P22362 AC063926.2-201ENST00000623766 1308 ntBASIC12.07□□□□□ -0.48
CCL1P22362 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCL1P22362 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCL1P22362 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.06□□□□□ -0.48
CCL1P22362 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.06□□□□□ -0.48
CCL1P22362 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCL1P22362 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CCL1P22362 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.06□□□□□ -0.48
CCL1P22362 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCL1P22362 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCL1P22362 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCL1P22362 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.06□□□□□ -0.48
CCL1P22362 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCL1P22362 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.06□□□□□ -0.48
CCL1P22362 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCL1P22362 NRADDP-202ENST00000641269 1585 ntBASIC12.06□□□□□ -0.48
CCL1P22362 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCL1P22362 AC020763.3-201ENST00000625095 2904 ntBASIC12.06□□□□□ -0.48
CCL1P22362 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
CCL1P22362 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
CCL1P22362 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCL1P22362 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CCL1P22362 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CCL1P22362 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC12.06□□□□□ -0.48
CCL1P22362 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CCL1P22362 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CCL1P22362 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CCL1P22362 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.06□□□□□ -0.48
CCL1P22362 MIR658-201ENST00000385210 100 ntBASIC12.06□□□□□ -0.48
CCL1P22362 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC12.06□□□□□ -0.48
CCL1P22362 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms