Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF3P18847 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF3P18847 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF3P18847 USP35-204ENST00000530267 2419 ntTSL 2 BASIC18.84■□□□□ 0.61
ATF3P18847 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATF3P18847 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF3P18847 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
ATF3P18847 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF3P18847 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ATF3P18847 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ATF3P18847 AC022532.1-201ENST00000624563 1728 ntBASIC18.84■□□□□ 0.61
ATF3P18847 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF3P18847 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF3P18847 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC18.84■□□□□ 0.61
ATF3P18847 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATF3P18847 PMF1-201ENST00000368273 884 ntTSL 2 BASIC18.84■□□□□ 0.61
ATF3P18847 MIR193A-201ENST00000384882 88 ntBASIC18.84■□□□□ 0.61
ATF3P18847 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ATF3P18847 NAA10-205ENST00000393712 908 ntTSL 5 BASIC18.84■□□□□ 0.61
ATF3P18847 SERF2-205ENST00000403425 690 ntTSL 2 BASIC18.84■□□□□ 0.61
ATF3P18847 AP001331.1-201ENST00000413008 1015 ntBASIC18.84■□□□□ 0.61
ATF3P18847 ASLP1-201ENST00000428790 637 ntBASIC18.84■□□□□ 0.61
ATF3P18847 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC18.84■□□□□ 0.61
ATF3P18847 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF3P18847 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC18.84■□□□□ 0.61
ATF3P18847 RN7SL69P-201ENST00000468423 272 ntBASIC18.84■□□□□ 0.61
ATF3P18847 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF3P18847 AP001102.1-201ENST00000528959 409 ntBASIC18.84■□□□□ 0.61
ATF3P18847 HNRNPA1P72-201ENST00000529511 967 ntBASIC18.84■□□□□ 0.61
ATF3P18847 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC18.84■□□□□ 0.61
ATF3P18847 AC245369.8-201ENST00000636589 306 ntBASIC18.84■□□□□ 0.61
ATF3P18847 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC18.84■□□□□ 0.61
ATF3P18847 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATF3P18847 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC18.84■□□□□ 0.61
ATF3P18847 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC18.84■□□□□ 0.61
ATF3P18847 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATF3P18847 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC18.84■□□□□ 0.61
ATF3P18847 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF3P18847 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF3P18847 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF3P18847 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF3P18847 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF3P18847 AC089987.1-201ENST00000551654 2209 ntBASIC18.84■□□□□ 0.61
ATF3P18847 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF3P18847 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.83■□□□□ 0.61
ATF3P18847 AC106872.9-201ENST00000512437 1393 ntBASIC18.83■□□□□ 0.61
ATF3P18847 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATF3P18847 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATF3P18847 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATF3P18847 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ATF3P18847 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC18.83■□□□□ 0.61
ATF3P18847 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATF3P18847 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ATF3P18847 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATF3P18847 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATF3P18847 PPP1R2P10-201ENST00000393023 595 ntBASIC18.83■□□□□ 0.6
ATF3P18847 SNORA50D-201ENST00000408059 134 ntBASIC18.83■□□□□ 0.6
ATF3P18847 RPSAP61-201ENST00000412542 878 ntBASIC18.83■□□□□ 0.6
ATF3P18847 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC18.83■□□□□ 0.6
ATF3P18847 RPL3P9-201ENST00000463217 1183 ntBASIC18.83■□□□□ 0.6
ATF3P18847 JPT1-205ENST00000470924 663 ntTSL 5 BASIC18.83■□□□□ 0.6
ATF3P18847 RN7SL638P-201ENST00000494527 290 ntBASIC18.83■□□□□ 0.6
ATF3P18847 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC18.83■□□□□ 0.6
ATF3P18847 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATF3P18847 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC18.83■□□□□ 0.6
ATF3P18847 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC18.83■□□□□ 0.6
ATF3P18847 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATF3P18847 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC18.83■□□□□ 0.6
ATF3P18847 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATF3P18847 AC006486.2-201ENST00000624246 2199 ntBASIC18.83■□□□□ 0.6
ATF3P18847 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.83■□□□□ 0.6
ATF3P18847 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.83■□□□□ 0.6
ATF3P18847 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATF3P18847 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.83■□□□□ 0.6
ATF3P18847 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC18.83■□□□□ 0.6
ATF3P18847 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATF3P18847 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ATF3P18847 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATF3P18847 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
ATF3P18847 ADK-205ENST00000539909 1866 ntTSL 2 BASIC18.82■□□□□ 0.6
ATF3P18847 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATF3P18847 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATF3P18847 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATF3P18847 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATF3P18847 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATF3P18847 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ATF3P18847 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC18.82■□□□□ 0.6
ATF3P18847 TPT1P11-201ENST00000458482 498 ntBASIC18.82■□□□□ 0.6
ATF3P18847 RN7SL677P-201ENST00000466970 319 ntBASIC18.82■□□□□ 0.6
ATF3P18847 RN7SL452P-201ENST00000482923 291 ntBASIC18.82■□□□□ 0.6
ATF3P18847 AC104117.4-201ENST00000521486 847 ntBASIC18.82■□□□□ 0.6
ATF3P18847 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC18.82■□□□□ 0.6
ATF3P18847 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC18.82■□□□□ 0.6
ATF3P18847 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC18.82■□□□□ 0.6
ATF3P18847 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC18.82■□□□□ 0.6
ATF3P18847 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC18.82■□□□□ 0.6
ATF3P18847 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATF3P18847 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATF3P18847 AC092535.4-201ENST00000609548 397 ntBASIC18.82■□□□□ 0.6
ATF3P18847 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms