Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC11.54□□□□□ -0.56
DEFA4P12838 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
DEFA4P12838 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.54□□□□□ -0.56
DEFA4P12838 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
DEFA4P12838 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC11.54□□□□□ -0.56
DEFA4P12838 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
DEFA4P12838 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC11.54□□□□□ -0.56
DEFA4P12838 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC11.54□□□□□ -0.56
DEFA4P12838 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
DEFA4P12838 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
DEFA4P12838 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
DEFA4P12838 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC11.53□□□□□ -0.56
DEFA4P12838 STX3-207ENST00000633708 3111 ntTSL 5 BASIC11.53□□□□□ -0.56
DEFA4P12838 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
DEFA4P12838 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC11.53□□□□□ -0.56
DEFA4P12838 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC11.53□□□□□ -0.56
DEFA4P12838 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 CALY-203ENST00000368558 825 ntTSL 5 BASIC11.53□□□□□ -0.56
DEFA4P12838 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 BOLA2P3-201ENST00000404566 256 ntBASIC11.53□□□□□ -0.56
DEFA4P12838 COX5BP8-201ENST00000416911 349 ntBASIC11.53□□□□□ -0.56
DEFA4P12838 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC11.53□□□□□ -0.56
DEFA4P12838 SKA2-202ENST00000437036 625 ntTSL 2 BASIC11.53□□□□□ -0.56
DEFA4P12838 HOMER2P2-201ENST00000451621 847 ntBASIC11.53□□□□□ -0.56
DEFA4P12838 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
DEFA4P12838 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 AC079316.1-201ENST00000548397 411 ntBASIC11.53□□□□□ -0.56
DEFA4P12838 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC11.53□□□□□ -0.56
DEFA4P12838 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC11.53□□□□□ -0.56
DEFA4P12838 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC11.53□□□□□ -0.56
DEFA4P12838 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC11.53□□□□□ -0.56
DEFA4P12838 RHOXF1P1-202ENST00000635473 501 ntBASIC11.53□□□□□ -0.56
DEFA4P12838 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC11.53□□□□□ -0.56
DEFA4P12838 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC11.53□□□□□ -0.56
DEFA4P12838 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
DEFA4P12838 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC11.53□□□□□ -0.56
DEFA4P12838 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC11.53□□□□□ -0.56
DEFA4P12838 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
DEFA4P12838 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC11.53□□□□□ -0.56
DEFA4P12838 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC11.53□□□□□ -0.56
DEFA4P12838 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC11.53□□□□□ -0.56
DEFA4P12838 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC11.52□□□□□ -0.56
DEFA4P12838 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
DEFA4P12838 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
DEFA4P12838 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC11.52□□□□□ -0.56
DEFA4P12838 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC11.52□□□□□ -0.56
DEFA4P12838 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
DEFA4P12838 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
DEFA4P12838 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC11.52□□□□□ -0.56
DEFA4P12838 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
DEFA4P12838 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
DEFA4P12838 AL928654.5-201ENST00000624831 2501 ntBASIC11.52□□□□□ -0.56
DEFA4P12838 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
DEFA4P12838 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC11.52□□□□□ -0.56
DEFA4P12838 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms