Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR3DP05423 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC16.81■□□□□ 0.28
POLR3DP05423 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR3DP05423 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.81■□□□□ 0.28
POLR3DP05423 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
POLR3DP05423 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC16.81■□□□□ 0.28
POLR3DP05423 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC16.81■□□□□ 0.28
POLR3DP05423 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC16.81■□□□□ 0.28
POLR3DP05423 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.81■□□□□ 0.28
POLR3DP05423 SLC25A15P3-201ENST00000505530 290 ntBASIC16.81■□□□□ 0.28
POLR3DP05423 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.81■□□□□ 0.28
POLR3DP05423 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.81■□□□□ 0.28
POLR3DP05423 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.81■□□□□ 0.28
POLR3DP05423 AC145285.5-201ENST00000562217 361 ntBASIC16.81■□□□□ 0.28
POLR3DP05423 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC16.81■□□□□ 0.28
POLR3DP05423 NUDT4P2-201ENST00000578341 546 ntBASIC16.81■□□□□ 0.28
POLR3DP05423 MIR2392-201ENST00000584881 84 ntBASIC16.81■□□□□ 0.28
POLR3DP05423 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
POLR3DP05423 AP000322.3-201ENST00000608665 388 ntBASIC16.81■□□□□ 0.28
POLR3DP05423 AP003419.4-201ENST00000616071 517 ntBASIC16.81■□□□□ 0.28
POLR3DP05423 SRC-202ENST00000373558 4304 ntTSL 5 BASIC16.81■□□□□ 0.28
POLR3DP05423 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR3DP05423 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
POLR3DP05423 LINC02486-201ENST00000604157 3000 ntBASIC16.81■□□□□ 0.28
POLR3DP05423 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
POLR3DP05423 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
POLR3DP05423 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
POLR3DP05423 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR3DP05423 AL157996.1-201ENST00000624684 2299 ntBASIC16.81■□□□□ 0.28
POLR3DP05423 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR3DP05423 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR3DP05423 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.81■□□□□ 0.28
POLR3DP05423 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
POLR3DP05423 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR3DP05423 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR3DP05423 KRT8P24-201ENST00000560290 1559 ntBASIC16.81■□□□□ 0.28
POLR3DP05423 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
POLR3DP05423 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
POLR3DP05423 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR3DP05423 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR3DP05423 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
POLR3DP05423 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR3DP05423 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
POLR3DP05423 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC16.8■□□□□ 0.28
POLR3DP05423 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC16.8■□□□□ 0.28
POLR3DP05423 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR3DP05423 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC16.8■□□□□ 0.28
POLR3DP05423 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.8■□□□□ 0.28
POLR3DP05423 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC16.8■□□□□ 0.28
POLR3DP05423 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR3DP05423 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
POLR3DP05423 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR3DP05423 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
POLR3DP05423 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
POLR3DP05423 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR3DP05423 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR3DP05423 PTENP1-202ENST00000532280 3996 ntBASIC16.8■□□□□ 0.28
POLR3DP05423 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.8■□□□□ 0.28
POLR3DP05423 AL359881.3-201ENST00000602640 1721 ntBASIC16.8■□□□□ 0.28
POLR3DP05423 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR3DP05423 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR3DP05423 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR3DP05423 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR3DP05423 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
POLR3DP05423 RN7SKP109-201ENST00000410592 316 ntBASIC16.8■□□□□ 0.28
POLR3DP05423 AC253536.4-201ENST00000440539 267 ntBASIC16.8■□□□□ 0.28
POLR3DP05423 AL354861.1-201ENST00000445213 355 ntBASIC16.8■□□□□ 0.28
POLR3DP05423 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.8■□□□□ 0.28
POLR3DP05423 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC16.8■□□□□ 0.28
POLR3DP05423 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.8■□□□□ 0.28
POLR3DP05423 RNA5SP417-201ENST00000516459 108 ntBASIC16.8■□□□□ 0.28
POLR3DP05423 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.8■□□□□ 0.28
POLR3DP05423 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16.8■□□□□ 0.28
POLR3DP05423 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC16.8■□□□□ 0.28
POLR3DP05423 KLF17P1-201ENST00000547105 1126 ntBASIC16.8■□□□□ 0.28
POLR3DP05423 RN7SL455P-201ENST00000580629 282 ntBASIC16.8■□□□□ 0.28
POLR3DP05423 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
POLR3DP05423 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC16.8■□□□□ 0.28
POLR3DP05423 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR3DP05423 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR3DP05423 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR3DP05423 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR3DP05423 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR3DP05423 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR3DP05423 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR3DP05423 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR3DP05423 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR3DP05423 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR3DP05423 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC16.79■□□□□ 0.28
POLR3DP05423 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR3DP05423 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR3DP05423 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR3DP05423 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR3DP05423 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR3DP05423 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR3DP05423 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR3DP05423 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR3DP05423 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR3DP05423 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR3DP05423 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms