Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VTNP04004 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VTNP04004 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VTNP04004 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VTNP04004 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
VTNP04004 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VTNP04004 SSR4-202ENST00000370085 526 ntTSL 2 BASIC15.3■□□□□ 0.04
VTNP04004 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VTNP04004 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
VTNP04004 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
VTNP04004 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
VTNP04004 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
VTNP04004 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC15.3■□□□□ 0.04
VTNP04004 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC15.3■□□□□ 0.04
VTNP04004 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC15.3■□□□□ 0.04
VTNP04004 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VTNP04004 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.3■□□□□ 0.04
VTNP04004 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
VTNP04004 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC15.3■□□□□ 0.04
VTNP04004 GCSHP3-201ENST00000431120 391 ntBASIC15.3■□□□□ 0.04
VTNP04004 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC15.3■□□□□ 0.04
VTNP04004 KRT18P66-201ENST00000452970 1269 ntBASIC15.3■□□□□ 0.04
VTNP04004 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VTNP04004 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VTNP04004 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
VTNP04004 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VTNP04004 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VTNP04004 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC15.3■□□□□ 0.04
VTNP04004 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC15.3■□□□□ 0.04
VTNP04004 TREHP1-201ENST00000531328 465 ntBASIC15.3■□□□□ 0.04
VTNP04004 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
VTNP04004 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VTNP04004 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VTNP04004 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC15.3■□□□□ 0.04
VTNP04004 GOLGA8IP-202ENST00000611635 2100 ntBASIC15.3■□□□□ 0.04
VTNP04004 AL139424.3-202ENST00000641619 917 ntBASIC15.3■□□□□ 0.04
VTNP04004 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VTNP04004 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VTNP04004 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
VTNP04004 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VTNP04004 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC15.3■□□□□ 0.04
VTNP04004 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.3■□□□□ 0.04
VTNP04004 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VTNP04004 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VTNP04004 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VTNP04004 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
VTNP04004 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
VTNP04004 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VTNP04004 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VTNP04004 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VTNP04004 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VTNP04004 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
VTNP04004 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VTNP04004 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
VTNP04004 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VTNP04004 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VTNP04004 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VTNP04004 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
VTNP04004 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VTNP04004 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VTNP04004 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC15.29■□□□□ 0.04
VTNP04004 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC15.29■□□□□ 0.04
VTNP04004 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VTNP04004 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC15.29■□□□□ 0.04
VTNP04004 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC15.29■□□□□ 0.04
VTNP04004 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC15.29■□□□□ 0.04
VTNP04004 AC008026.2-201ENST00000495438 348 ntBASIC15.29■□□□□ 0.04
VTNP04004 KRT18P37-201ENST00000520711 1282 ntBASIC15.29■□□□□ 0.04
VTNP04004 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.29■□□□□ 0.04
VTNP04004 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC15.29■□□□□ 0.04
VTNP04004 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
VTNP04004 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC15.29■□□□□ 0.04
VTNP04004 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.29■□□□□ 0.04
VTNP04004 AC068418.2-201ENST00000577309 3703 ntBASIC15.29■□□□□ 0.04
VTNP04004 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VTNP04004 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VTNP04004 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VTNP04004 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VTNP04004 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VTNP04004 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.29■□□□□ 0.04
VTNP04004 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VTNP04004 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VTNP04004 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VTNP04004 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.29■□□□□ 0.04
VTNP04004 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VTNP04004 FMO6P-201ENST00000236166 1620 ntBASIC15.28■□□□□ 0.04
VTNP04004 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC15.28■□□□□ 0.04
VTNP04004 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.28■□□□□ 0.04
VTNP04004 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VTNP04004 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
VTNP04004 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VTNP04004 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.28■□□□□ 0.04
VTNP04004 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VTNP04004 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VTNP04004 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VTNP04004 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VTNP04004 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VTNP04004 DKKL1P1-201ENST00000400550 698 ntBASIC15.28■□□□□ 0.04
VTNP04004 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
VTNP04004 BCAS2P2-201ENST00000425064 674 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms