Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC137723.2-201ENST00000623540 398 ntBASIC6.02□□□□□ -1.45
USH2AO75445 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC6.01□□□□□ -1.45
USH2AO75445 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC6.01□□□□□ -1.45
USH2AO75445 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC6.01□□□□□ -1.45
USH2AO75445 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
USH2AO75445 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC6.01□□□□□ -1.45
USH2AO75445 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC6.01□□□□□ -1.45
USH2AO75445 CDKN2AIPNLP2-201ENST00000274516 352 ntBASIC6.01□□□□□ -1.45
USH2AO75445 RARRES3-202ENST00000354445 696 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
USH2AO75445 SYCP3-203ENST00000392927 1120 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 SNORD88B-201ENST00000408454 91 ntBASIC6.01□□□□□ -1.45
USH2AO75445 AC087441.1-201ENST00000531069 301 ntBASIC6.01□□□□□ -1.45
USH2AO75445 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC6.01□□□□□ -1.45
USH2AO75445 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC6.01□□□□□ -1.45
USH2AO75445 MT1G-204ENST00000569500 305 ntTSL 3 BASIC6.01□□□□□ -1.45
USH2AO75445 MIR4539-201ENST00000579784 60 ntBASIC6.01□□□□□ -1.45
USH2AO75445 SNORD55-201ENST00000581525 80 ntBASIC6.01□□□□□ -1.45
USH2AO75445 C5orf60-208ENST00000625191 1208 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
USH2AO75445 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 AC073585.1-201ENST00000368895 1328 ntBASIC6.01□□□□□ -1.45
USH2AO75445 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
USH2AO75445 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
USH2AO75445 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC6.01□□□□□ -1.45
USH2AO75445 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC6.01□□□□□ -1.45
USH2AO75445 RPL15-202ENST00000354811 820 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 AC103592.1-201ENST00000394513 664 ntBASIC6.01□□□□□ -1.45
USH2AO75445 LINC00313-206ENST00000441283 448 ntTSL 3 BASIC6.01□□□□□ -1.45
USH2AO75445 AL589674.1-201ENST00000454401 222 ntTSL 5 BASIC6.01□□□□□ -1.45
USH2AO75445 RPL18P1-201ENST00000497218 552 ntBASIC6.01□□□□□ -1.45
USH2AO75445 AC021594.2-201ENST00000592499 527 ntTSL 3 BASIC6.01□□□□□ -1.45
USH2AO75445 FXYD3-207ENST00000604255 780 ntTSL 5 BASIC6.01□□□□□ -1.45
USH2AO75445 Metazoa_SRP.82-201ENST00000611637 265 ntBASIC6.01□□□□□ -1.45
USH2AO75445 AL137785.1-201ENST00000637466 490 ntTSL 5 BASIC6.01□□□□□ -1.45
USH2AO75445 ERGIC3-220ENST00000640748 832 ntTSL 5 BASIC6.01□□□□□ -1.45
USH2AO75445 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
USH2AO75445 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 ST5-258ENST00000534278 1352 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 CA6-205ENST00000480186 1493 ntTSL 2 BASIC6.01□□□□□ -1.45
USH2AO75445 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
USH2AO75445 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
USH2AO75445 CDA-201ENST00000375071 963 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 AC022483.2-201ENST00000461464 555 ntBASIC6.01□□□□□ -1.45
USH2AO75445 MGC32805-201ENST00000503529 579 ntTSL 3 BASIC6.01□□□□□ -1.45
USH2AO75445 AC008514.1-203ENST00000518172 574 ntTSL 4 BASIC6.01□□□□□ -1.45
USH2AO75445 RPL38-206ENST00000533498 532 ntAPPRIS P2 TSL 2 BASIC6.01□□□□□ -1.45
USH2AO75445 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC6.01□□□□□ -1.45
USH2AO75445 SORD2P-201ENST00000558556 1069 ntBASIC6.01□□□□□ -1.45
USH2AO75445 RN7SL162P-201ENST00000579233 292 ntBASIC6.01□□□□□ -1.45
USH2AO75445 AC005154.1-204ENST00000580902 926 ntTSL 4 BASIC6.01□□□□□ -1.45
USH2AO75445 AC092069.1-201ENST00000589120 270 ntTSL 3 BASIC6.01□□□□□ -1.45
USH2AO75445 MYO5BP1-201ENST00000610994 1239 ntBASIC6.01□□□□□ -1.45
USH2AO75445 AL160408.6-201ENST00000632063 1257 ntTSL 5 BASIC6.01□□□□□ -1.45
USH2AO75445 AC009542.2-204ENST00000636543 433 ntTSL 3 BASIC6.01□□□□□ -1.45
USH2AO75445 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
USH2AO75445 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC6.01□□□□□ -1.45
USH2AO75445 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 AL139158.3-201ENST00000641212 1562 ntBASIC6.01□□□□□ -1.45
USH2AO75445 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
USH2AO75445 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
USH2AO75445 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC6.01□□□□□ -1.45
USH2AO75445 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC6.01□□□□□ -1.45
USH2AO75445 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC6.01□□□□□ -1.45
USH2AO75445 AP000487.2-201ENST00000324630 394 ntTSL 3 BASIC6.01□□□□□ -1.45
USH2AO75445 KRTAP10-8-201ENST00000334662 876 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
USH2AO75445 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
USH2AO75445 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC6.01□□□□□ -1.45
USH2AO75445 LINC02151-201ENST00000452629 921 ntTSL 2 BASIC6.01□□□□□ -1.45
USH2AO75445 ARL15-205ENST00000507646 578 ntTSL 5 BASIC6.01□□□□□ -1.45
USH2AO75445 AP003392.3-201ENST00000531886 667 ntTSL 5 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms