Protein–RNA interactions for Protein: O75396

SEC22B, Vesicle-trafficking protein SEC22b, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22BO75396 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SEC22BO75396 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.62□□□□□ -0.23
SEC22BO75396 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.62□□□□□ -0.23
SEC22BO75396 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC22BO75396 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.62□□□□□ -0.23
SEC22BO75396 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.62□□□□□ -0.23
SEC22BO75396 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC22BO75396 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SEC22BO75396 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.62□□□□□ -0.23
SEC22BO75396 PCDHA6-201ENST00000378126 3267 ntBASIC13.62□□□□□ -0.23
SEC22BO75396 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC22BO75396 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC13.62□□□□□ -0.23
SEC22BO75396 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC22BO75396 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC22BO75396 REXO1L1P-201ENST00000379010 6598 ntBASIC13.62□□□□□ -0.23
SEC22BO75396 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
SEC22BO75396 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC22BO75396 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
SEC22BO75396 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC22BO75396 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC22BO75396 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC22BO75396 AL035633.1-201ENST00000406139 838 ntBASIC13.62□□□□□ -0.23
SEC22BO75396 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC22BO75396 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.62□□□□□ -0.23
SEC22BO75396 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SEC22BO75396 XBP1P1-201ENST00000436573 652 ntBASIC13.62□□□□□ -0.23
SEC22BO75396 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.62□□□□□ -0.23
SEC22BO75396 SNX29P1-201ENST00000548357 1007 ntBASIC13.62□□□□□ -0.23
SEC22BO75396 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.62□□□□□ -0.23
SEC22BO75396 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.62□□□□□ -0.23
SEC22BO75396 DUX4L45-201ENST00000566406 1057 ntBASIC13.62□□□□□ -0.23
SEC22BO75396 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.62□□□□□ -0.23
SEC22BO75396 JPT2-214ENST00000569765 782 ntTSL 2 BASIC13.62□□□□□ -0.23
SEC22BO75396 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SEC22BO75396 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SEC22BO75396 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.62□□□□□ -0.23
SEC22BO75396 AC004623.1-201ENST00000624592 2127 ntBASIC13.62□□□□□ -0.23
SEC22BO75396 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC22BO75396 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC22BO75396 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.62□□□□□ -0.23
SEC22BO75396 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.62□□□□□ -0.23
SEC22BO75396 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SEC22BO75396 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SEC22BO75396 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC22BO75396 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SEC22BO75396 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC22BO75396 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC22BO75396 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC22BO75396 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC22BO75396 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC22BO75396 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC22BO75396 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
SEC22BO75396 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC22BO75396 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.62□□□□□ -0.23
SEC22BO75396 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SEC22BO75396 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC22BO75396 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC22BO75396 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SEC22BO75396 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC22BO75396 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.61□□□□□ -0.23
SEC22BO75396 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SEC22BO75396 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC22BO75396 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC22BO75396 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SEC22BO75396 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC22BO75396 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SEC22BO75396 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC22BO75396 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC22BO75396 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC22BO75396 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC22BO75396 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SEC22BO75396 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC22BO75396 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.61□□□□□ -0.23
SEC22BO75396 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC22BO75396 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC22BO75396 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.61□□□□□ -0.23
SEC22BO75396 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
SEC22BO75396 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
SEC22BO75396 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SEC22BO75396 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SEC22BO75396 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC13.61□□□□□ -0.23
SEC22BO75396 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SEC22BO75396 SALL4P6-201ENST00000429385 1691 ntBASIC13.61□□□□□ -0.23
SEC22BO75396 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC22BO75396 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SEC22BO75396 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
SEC22BO75396 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SEC22BO75396 AC099336.1-201ENST00000417053 1171 ntBASIC13.61□□□□□ -0.23
SEC22BO75396 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC22BO75396 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.61□□□□□ -0.23
SEC22BO75396 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.61□□□□□ -0.23
SEC22BO75396 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.61□□□□□ -0.23
SEC22BO75396 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC22BO75396 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
SEC22BO75396 RPL18P13-201ENST00000478088 569 ntBASIC13.61□□□□□ -0.23
SEC22BO75396 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.61□□□□□ -0.23
SEC22BO75396 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC22BO75396 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.61□□□□□ -0.23
SEC22BO75396 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC22BO75396 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms