Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 MIR33B-201ENST00000385104 96 ntBASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 CHCHD2P2-201ENST00000503744 321 ntBASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL4A3BPQ9Y5P4 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 NOC2LP1-201ENST00000450578 752 ntBASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 MIR4522-201ENST00000584932 87 ntBASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 AC005632.3-201ENST00000605544 308 ntBASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
COL4A3BPQ9Y5P4 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 AC073548.1-201ENST00000624088 1882 ntBASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 DUT-208ENST00000559540 1441 ntTSL 2 BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 AP000356.3-201ENST00000382243 753 ntBASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 MIR645-201ENST00000385283 94 ntBASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 BAX-205ENST00000391871 687 ntTSL 5 BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 MIR4706-201ENST00000582134 82 ntBASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 AC138894.2-201ENST00000602838 371 ntBASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 CR392039.2-201ENST00000623182 509 ntBASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.72■□□□□ 0.11
COL4A3BPQ9Y5P4 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms