Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 LINC00538-201ENST00000626109 1906 ntBASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.7□□□□□ -0.22
CUEDC1Q9NWM3 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 AL365181.3-201ENST00000605886 3222 ntBASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 NAT9-211ENST00000580632 799 ntTSL 3 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CUEDC1Q9NWM3 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 SHMT1P1-201ENST00000419974 1312 ntBASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 PDIA3P2-201ENST00000428073 158 ntBASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 AC069218.1-201ENST00000435269 762 ntBASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 AC234782.1-201ENST00000451950 919 ntBASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 NUP210P1-202ENST00000504322 710 ntBASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 ALG1L13P-202ENST00000519320 584 ntBASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.68□□□□□ -0.22
CUEDC1Q9NWM3 MIR3147-201ENST00000577811 66 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms