Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.71■□□□□ 0.11
CBX8Q9HC52 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CBX8Q9HC52 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CBX8Q9HC52 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CBX8Q9HC52 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 AC005229.1-201ENST00000392885 409 ntBASIC15.71■□□□□ 0.11
CBX8Q9HC52 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.71■□□□□ 0.11
CBX8Q9HC52 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.71■□□□□ 0.11
CBX8Q9HC52 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC15.71■□□□□ 0.11
CBX8Q9HC52 AC003958.1-201ENST00000435883 421 ntBASIC15.71■□□□□ 0.11
CBX8Q9HC52 AL355994.2-201ENST00000447882 704 ntBASIC15.71■□□□□ 0.11
CBX8Q9HC52 HIST2H2BB-201ENST00000449108 381 ntBASIC15.71■□□□□ 0.11
CBX8Q9HC52 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.71■□□□□ 0.11
CBX8Q9HC52 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.71■□□□□ 0.11
CBX8Q9HC52 SPCS2P1-201ENST00000561636 679 ntBASIC15.71■□□□□ 0.11
CBX8Q9HC52 C2orf69P2-201ENST00000562032 1123 ntBASIC15.71■□□□□ 0.11
CBX8Q9HC52 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.71■□□□□ 0.11
CBX8Q9HC52 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.71■□□□□ 0.11
CBX8Q9HC52 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.71■□□□□ 0.11
CBX8Q9HC52 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.71■□□□□ 0.11
CBX8Q9HC52 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.71■□□□□ 0.11
CBX8Q9HC52 AC138951.2-201ENST00000623455 1161 ntBASIC15.71■□□□□ 0.11
CBX8Q9HC52 AL161773.1-201ENST00000624845 863 ntBASIC15.71■□□□□ 0.11
CBX8Q9HC52 Z98259.2-201ENST00000641583 609 ntBASIC15.71■□□□□ 0.11
CBX8Q9HC52 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC15.71■□□□□ 0.11
CBX8Q9HC52 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.71■□□□□ 0.11
CBX8Q9HC52 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CBX8Q9HC52 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC15.71■□□□□ 0.11
CBX8Q9HC52 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CBX8Q9HC52 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CBX8Q9HC52 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CBX8Q9HC52 AL139158.3-201ENST00000641212 1562 ntBASIC15.7■□□□□ 0.1
CBX8Q9HC52 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CBX8Q9HC52 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX8Q9HC52 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX8Q9HC52 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX8Q9HC52 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX8Q9HC52 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX8Q9HC52 SUPT20HL1-201ENST00000436466 2618 ntBASIC15.7■□□□□ 0.1
CBX8Q9HC52 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX8Q9HC52 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX8Q9HC52 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.7■□□□□ 0.1
CBX8Q9HC52 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.7■□□□□ 0.1
CBX8Q9HC52 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX8Q9HC52 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CBX8Q9HC52 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX8Q9HC52 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CBX8Q9HC52 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX8Q9HC52 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX8Q9HC52 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CBX8Q9HC52 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC15.7■□□□□ 0.1
CBX8Q9HC52 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX8Q9HC52 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CBX8Q9HC52 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CBX8Q9HC52 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.7■□□□□ 0.1
CBX8Q9HC52 AC092580.1-201ENST00000433998 658 ntBASIC15.7■□□□□ 0.1
CBX8Q9HC52 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CBX8Q9HC52 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.7■□□□□ 0.1
CBX8Q9HC52 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.7■□□□□ 0.1
CBX8Q9HC52 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.7■□□□□ 0.1
CBX8Q9HC52 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.7■□□□□ 0.1
CBX8Q9HC52 AC140658.4-201ENST00000561990 352 ntBASIC15.7■□□□□ 0.1
CBX8Q9HC52 LINC02560-201ENST00000596379 459 ntBASIC15.7■□□□□ 0.1
CBX8Q9HC52 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.7■□□□□ 0.1
CBX8Q9HC52 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CBX8Q9HC52 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
CBX8Q9HC52 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC15.7■□□□□ 0.1
CBX8Q9HC52 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC15.7■□□□□ 0.1
CBX8Q9HC52 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX8Q9HC52 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX8Q9HC52 AL031432.4-201ENST00000641729 2190 ntBASIC15.7■□□□□ 0.1
CBX8Q9HC52 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX8Q9HC52 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX8Q9HC52 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms