Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC16.9■□□□□ 0.3
EYA3Q99504 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EYA3Q99504 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC16.9■□□□□ 0.3
EYA3Q99504 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC16.9■□□□□ 0.3
EYA3Q99504 FAM187B2P-201ENST00000577135 713 ntBASIC16.9■□□□□ 0.3
EYA3Q99504 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC16.9■□□□□ 0.3
EYA3Q99504 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC16.9■□□□□ 0.3
EYA3Q99504 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
EYA3Q99504 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EYA3Q99504 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EYA3Q99504 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EYA3Q99504 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EYA3Q99504 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC16.9■□□□□ 0.3
EYA3Q99504 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EYA3Q99504 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EYA3Q99504 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
EYA3Q99504 ENPP7P8-202ENST00000527856 1345 ntBASIC16.9■□□□□ 0.3
EYA3Q99504 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EYA3Q99504 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EYA3Q99504 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
EYA3Q99504 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
EYA3Q99504 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EYA3Q99504 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
EYA3Q99504 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.9■□□□□ 0.3
EYA3Q99504 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
EYA3Q99504 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.9■□□□□ 0.3
EYA3Q99504 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EYA3Q99504 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
EYA3Q99504 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
EYA3Q99504 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.89■□□□□ 0.29
EYA3Q99504 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC16.89■□□□□ 0.29
EYA3Q99504 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EYA3Q99504 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
EYA3Q99504 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EYA3Q99504 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EYA3Q99504 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
EYA3Q99504 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
EYA3Q99504 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
EYA3Q99504 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
EYA3Q99504 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EYA3Q99504 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EYA3Q99504 PGAM1P11-201ENST00000416729 680 ntBASIC16.89■□□□□ 0.29
EYA3Q99504 AC041040.1-201ENST00000425197 460 ntBASIC16.89■□□□□ 0.29
EYA3Q99504 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC16.89■□□□□ 0.29
EYA3Q99504 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC16.89■□□□□ 0.29
EYA3Q99504 AC023906.1-201ENST00000486386 453 ntBASIC16.89■□□□□ 0.29
EYA3Q99504 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
EYA3Q99504 AC004801.1-201ENST00000549557 360 ntBASIC16.89■□□□□ 0.29
EYA3Q99504 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
EYA3Q99504 RN7SL121P-201ENST00000584223 273 ntBASIC16.89■□□□□ 0.29
EYA3Q99504 GGNBP1-204ENST00000613113 887 ntBASIC16.89■□□□□ 0.29
EYA3Q99504 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC16.89■□□□□ 0.29
EYA3Q99504 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EYA3Q99504 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC16.89■□□□□ 0.29
EYA3Q99504 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
EYA3Q99504 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
EYA3Q99504 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EYA3Q99504 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC16.89■□□□□ 0.29
EYA3Q99504 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.89■□□□□ 0.29
EYA3Q99504 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.89■□□□□ 0.29
EYA3Q99504 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EYA3Q99504 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.89■□□□□ 0.29
EYA3Q99504 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EYA3Q99504 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC16.89■□□□□ 0.29
EYA3Q99504 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EYA3Q99504 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
EYA3Q99504 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
EYA3Q99504 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EYA3Q99504 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.89■□□□□ 0.29
EYA3Q99504 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EYA3Q99504 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EYA3Q99504 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
EYA3Q99504 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EYA3Q99504 AC012617.1-204ENST00000586340 2305 ntBASIC16.88■□□□□ 0.29
EYA3Q99504 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.88■□□□□ 0.29
EYA3Q99504 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EYA3Q99504 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.88■□□□□ 0.29
EYA3Q99504 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EYA3Q99504 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EYA3Q99504 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC16.88■□□□□ 0.29
EYA3Q99504 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EYA3Q99504 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
EYA3Q99504 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EYA3Q99504 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EYA3Q99504 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC16.88■□□□□ 0.29
EYA3Q99504 RNLS-203ENST00000437752 525 ntTSL 2 BASIC16.88■□□□□ 0.29
EYA3Q99504 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
EYA3Q99504 AC104212.2-201ENST00000478813 628 ntBASIC16.88■□□□□ 0.29
EYA3Q99504 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC16.88■□□□□ 0.29
EYA3Q99504 CD44-224ENST00000526669 870 ntTSL 5 BASIC16.88■□□□□ 0.29
EYA3Q99504 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EYA3Q99504 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC16.88■□□□□ 0.29
EYA3Q99504 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC16.88■□□□□ 0.29
EYA3Q99504 AC018846.1-201ENST00000568231 183 ntBASIC16.88■□□□□ 0.29
EYA3Q99504 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC16.88■□□□□ 0.29
EYA3Q99504 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
EYA3Q99504 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.88■□□□□ 0.29
EYA3Q99504 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.88■□□□□ 0.29
EYA3Q99504 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EYA3Q99504 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms