Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHAMP1Q96JM3 AC020917.4-201ENST00000623994 1999 ntBASIC16.33■□□□□ 0.21
CHAMP1Q96JM3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHAMP1Q96JM3 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHAMP1Q96JM3 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CHAMP1Q96JM3 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC16.33■□□□□ 0.21
CHAMP1Q96JM3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHAMP1Q96JM3 AC131212.3-201ENST00000624087 4219 ntBASIC16.33■□□□□ 0.21
CHAMP1Q96JM3 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 AC015936.2-201ENST00000593177 259 ntBASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.33■□□□□ 0.2
CHAMP1Q96JM3 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 PGAM1P5-201ENST00000548011 764 ntBASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 AC106886.1-201ENST00000568660 600 ntBASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 AL162426.1-201ENST00000624141 743 ntBASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 PAM-203ENST00000346918 3302 ntTSL 5 BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
CHAMP1Q96JM3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHAMP1Q96JM3 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms