Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTN4IP1Q8WWV3 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 ABCD1P2-201ENST00000429313 1601 ntBASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 POM121L14P-201ENST00000406100 1558 ntBASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 RPF1-202ENST00000370656 724 ntTSL 2 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 MIR1909-201ENST00000411312 80 ntBASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 CHMP1AP1-201ENST00000445563 662 ntBASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 NCK2-206ENST00000522586 490 ntTSL 5 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 AP006547.1-201ENST00000563435 692 ntBASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 AL136301.1-201ENST00000615830 422 ntBASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 AP000437.1-201ENST00000624057 2085 ntBASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RTN4IP1Q8WWV3 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 AL139385.1-201ENST00000611744 3272 ntBASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
RTN4IP1Q8WWV3 ANKRD19P-201ENST00000338192 862 ntBASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms