Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NUP35Q8NFH5 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
NUP35Q8NFH5 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC10.55□□□□□ -0.72
NUP35Q8NFH5 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC10.55□□□□□ -0.72
NUP35Q8NFH5 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC10.55□□□□□ -0.72
NUP35Q8NFH5 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 MANEA-AS1-201ENST00000564541 2268 ntBASIC10.54□□□□□ -0.72
NUP35Q8NFH5 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 PMP22-202ENST00000395936 816 ntTSL 3 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 PTPA-215ENST00000432124 567 ntTSL 4 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 RHOA-206ENST00000454011 889 ntTSL 2 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 AP000344.2-201ENST00000512987 629 ntBASIC10.54□□□□□ -0.72
NUP35Q8NFH5 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 PAM16-211ENST00000575848 518 ntTSL 3 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 LPO-204ENST00000543544 2350 ntTSL 2 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 USB1-207ENST00000563149 1751 ntTSL 2 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 FKBP4P6-201ENST00000457486 1332 ntBASIC10.54□□□□□ -0.72
NUP35Q8NFH5 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
NUP35Q8NFH5 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 USP39-220ENST00000613444 2161 ntTSL 2 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
NUP35Q8NFH5 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms