Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TTC9CQ8N5M4 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 CES1P1-201ENST00000421606 1704 ntBASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 TUBB4AP1-201ENST00000450755 1325 ntBASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 RN7SKP214-201ENST00000364208 315 ntBASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 OARD1-204ENST00000464633 717 ntTSL 2 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 RN7SL530P-201ENST00000485097 298 ntBASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 AC125604.1-201ENST00000496255 707 ntBASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 CHCHD2P2-201ENST00000503744 321 ntBASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 AC093752.3-201ENST00000567343 901 ntBASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 NAT9-222ENST00000583476 583 ntTSL 3 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 AL022328.3-201ENST00000607943 679 ntBASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 DUT-208ENST00000559540 1441 ntTSL 2 BASIC11.18□□□□□ -0.62
TTC9CQ8N5M4 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 AC073548.1-201ENST00000624088 1882 ntBASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 AL139158.3-201ENST00000641212 1562 ntBASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 NKAIN1P1-201ENST00000435754 582 ntBASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 ACTBP11-201ENST00000436287 1126 ntBASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 AL118558.3-201ENST00000607414 1079 ntBASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
TTC9CQ8N5M4 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms