Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 FGFR3P5-201ENST00000564496 886 ntBASIC12.76□□□□□ -0.37
ATG4DQ86TL0 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 MIR3619-201ENST00000579667 83 ntBASIC12.76□□□□□ -0.37
ATG4DQ86TL0 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 MEG3_2.1-201ENST00000611456 105 ntBASIC12.76□□□□□ -0.37
ATG4DQ86TL0 AF254983.2-201ENST00000612331 135 ntBASIC12.76□□□□□ -0.37
ATG4DQ86TL0 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 AC015967.2-201ENST00000624092 234 ntBASIC12.76□□□□□ -0.37
ATG4DQ86TL0 AC006435.4-201ENST00000625037 234 ntBASIC12.76□□□□□ -0.37
ATG4DQ86TL0 AC100757.4-201ENST00000626934 759 ntBASIC12.76□□□□□ -0.37
ATG4DQ86TL0 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 AL356737.1-201ENST00000634391 234 ntBASIC12.76□□□□□ -0.37
ATG4DQ86TL0 AL139424.3-202ENST00000641619 917 ntBASIC12.76□□□□□ -0.37
ATG4DQ86TL0 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 AC005014.1-201ENST00000432006 2976 ntBASIC12.76□□□□□ -0.37
ATG4DQ86TL0 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 AC108024.1-201ENST00000626286 1721 ntBASIC12.76□□□□□ -0.37
ATG4DQ86TL0 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 AC015909.3-201ENST00000572855 1794 ntBASIC12.76□□□□□ -0.37
ATG4DQ86TL0 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ATG4DQ86TL0 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 KRT17P5-201ENST00000332088 839 ntBASIC12.75□□□□□ -0.37
ATG4DQ86TL0 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 TCAF1P1-201ENST00000414990 2232 ntBASIC12.75□□□□□ -0.37
ATG4DQ86TL0 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 AL596276.2-201ENST00000447525 331 ntBASIC12.75□□□□□ -0.37
ATG4DQ86TL0 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 AC012618.1-201ENST00000461223 412 ntBASIC12.75□□□□□ -0.37
ATG4DQ86TL0 NUP210P1-202ENST00000504322 710 ntBASIC12.75□□□□□ -0.37
ATG4DQ86TL0 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 ALG1L13P-202ENST00000519320 584 ntBASIC12.75□□□□□ -0.37
ATG4DQ86TL0 AC024681.1-201ENST00000521917 487 ntBASIC12.75□□□□□ -0.37
ATG4DQ86TL0 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 AC005252.3-201ENST00000623855 2258 ntBASIC12.75□□□□□ -0.37
ATG4DQ86TL0 AL161773.1-201ENST00000624845 863 ntBASIC12.75□□□□□ -0.37
ATG4DQ86TL0 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ATG4DQ86TL0 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms