Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 AL139158.3-201ENST00000641212 1562 ntBASIC13.53□□□□□ -0.24
RNF44Q7L0R7 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.53□□□□□ -0.24
RNF44Q7L0R7 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RNF44Q7L0R7 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
RNF44Q7L0R7 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RNF44Q7L0R7 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
RNF44Q7L0R7 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RNF44Q7L0R7 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RNF44Q7L0R7 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 AL627231.1-201ENST00000394467 1125 ntBASIC13.52□□□□□ -0.25
RNF44Q7L0R7 PPP1R2P4-201ENST00000424051 595 ntBASIC13.52□□□□□ -0.25
RNF44Q7L0R7 MAGEA5-201ENST00000446757 942 ntBASIC13.52□□□□□ -0.25
RNF44Q7L0R7 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 NDUFS6P1-201ENST00000485187 316 ntBASIC13.52□□□□□ -0.25
RNF44Q7L0R7 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 TP53-221ENST00000615910 1149 ntTSL 5 BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 AC051619.9-201ENST00000623237 597 ntBASIC13.52□□□□□ -0.25
RNF44Q7L0R7 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 KRT8P24-201ENST00000560290 1559 ntBASIC13.52□□□□□ -0.25
RNF44Q7L0R7 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 AL591122.2-201ENST00000624125 1853 ntBASIC13.52□□□□□ -0.25
RNF44Q7L0R7 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
RNF44Q7L0R7 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 AC068760.1-201ENST00000493579 1953 ntBASIC13.51□□□□□ -0.25
RNF44Q7L0R7 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 MEX3B-202ENST00000558133 4333 ntBASIC13.51□□□□□ -0.25
RNF44Q7L0R7 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 AL592076.1-201ENST00000424448 303 ntBASIC13.51□□□□□ -0.25
RNF44Q7L0R7 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 EEF1DP6-201ENST00000449232 372 ntBASIC13.51□□□□□ -0.25
RNF44Q7L0R7 RPL18AP8-201ENST00000486071 528 ntBASIC13.51□□□□□ -0.25
RNF44Q7L0R7 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 RN7SL665P-201ENST00000578793 300 ntBASIC13.51□□□□□ -0.25
RNF44Q7L0R7 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 AC084346.2-201ENST00000607097 949 ntBASIC13.51□□□□□ -0.25
RNF44Q7L0R7 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RNF44Q7L0R7 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms