Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFWD3Q6PCD5 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 AL118506.1-201ENST00000601296 3082 ntBASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 MIR557-201ENST00000385239 98 ntBASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 AC073869.2-201ENST00000417338 1026 ntBASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 AC007326.1-201ENST00000604539 458 ntBASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 KRT8P31-201ENST00000504812 1408 ntBASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RFWD3Q6PCD5 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 AL807761.2-201ENST00000422849 729 ntBASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 DUTP3-201ENST00000450025 415 ntBASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 AL512310.5-201ENST00000551999 515 ntBASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 SIGLEC18P-201ENST00000602271 909 ntBASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 AC067931.2-201ENST00000623655 2003 ntBASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RFWD3Q6PCD5 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RFWD3Q6PCD5 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.71□□□□□ -0.06
RFWD3Q6PCD5 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms