Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 PXK-210ENST00000479241 2817 ntTSL 2 BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.22■□□□□ 0.19
SHROOM1Q2M3G4 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 SALL4P6-201ENST00000429385 1691 ntBASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 GOLGA8IP-202ENST00000611635 2100 ntBASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 KRT18P4-201ENST00000422599 1288 ntBASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 RN7SL288P-201ENST00000490496 291 ntBASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 AC073869.4-201ENST00000620841 800 ntBASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 AC139713.2-207ENST00000641556 1292 ntBASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SHROOM1Q2M3G4 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SHROOM1Q2M3G4 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 NORAD-201ENST00000565493 5339 ntBASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 AC022080.1-201ENST00000366255 781 ntBASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 DKKL1P1-201ENST00000400550 698 ntBASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 AP000244.1-201ENST00000424582 201 ntBASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 ASS1P2-201ENST00000439895 1223 ntBASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 DDX39AP1-201ENST00000445147 1181 ntBASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 NALT1-202ENST00000450304 437 ntTSL 3 BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 AP000769.1-203ENST00000637245 208 ntBASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHROOM1Q2M3G4 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SHROOM1Q2M3G4 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms