Protein–RNA interactions for Protein: Q0D2K0

NIPAL4, Magnesium transporter NIPA4, humanhuman

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL4Q0D2K0 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NIPAL4Q0D2K0 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 AC136604.1-202ENST00000425471 771 ntBASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 Z97180.1-201ENST00000445173 988 ntBASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 RPSAP15-201ENST00000448168 861 ntBASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 MIR3619-201ENST00000579667 83 ntBASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 LINC01783-202ENST00000614408 828 ntBASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 BX284668.2-205ENST00000619677 828 ntBASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 AC005014.1-201ENST00000432006 2976 ntBASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.31□□□□□ -0.12
NIPAL4Q0D2K0 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 AC008620.2-201ENST00000510294 1569 ntBASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 AC006987.1-201ENST00000413610 527 ntBASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 AC026803.1-201ENST00000569130 274 ntBASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 JPT2-214ENST00000569765 782 ntTSL 2 BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 AC020922.3-201ENST00000595064 547 ntBASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL4Q0D2K0 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms