Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ASIC1P78348 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.74■□□□□ 0.11
ASIC1P78348 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC15.73■□□□□ 0.11
ASIC1P78348 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
ASIC1P78348 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
ASIC1P78348 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.73■□□□□ 0.11
ASIC1P78348 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
ASIC1P78348 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
ASIC1P78348 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC15.73■□□□□ 0.11
ASIC1P78348 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ASIC1P78348 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ASIC1P78348 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC15.73■□□□□ 0.11
ASIC1P78348 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ASIC1P78348 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
ASIC1P78348 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
ASIC1P78348 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ASIC1P78348 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
ASIC1P78348 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ASIC1P78348 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ASIC1P78348 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
ASIC1P78348 AL391647.1-201ENST00000395664 511 ntBASIC15.73■□□□□ 0.11
ASIC1P78348 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ASIC1P78348 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.73■□□□□ 0.11
ASIC1P78348 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.73■□□□□ 0.11
ASIC1P78348 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.73■□□□□ 0.11
ASIC1P78348 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.73■□□□□ 0.11
ASIC1P78348 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.73■□□□□ 0.11
ASIC1P78348 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.73■□□□□ 0.11
ASIC1P78348 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15.73■□□□□ 0.11
ASIC1P78348 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15.73■□□□□ 0.11
ASIC1P78348 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.73■□□□□ 0.11
ASIC1P78348 NAP1L6-202ENST00000641404 1222 ntBASIC15.73■□□□□ 0.11
ASIC1P78348 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ASIC1P78348 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.73■□□□□ 0.11
ASIC1P78348 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
ASIC1P78348 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ASIC1P78348 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ASIC1P78348 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ASIC1P78348 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.73■□□□□ 0.11
ASIC1P78348 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ASIC1P78348 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ASIC1P78348 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ASIC1P78348 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ASIC1P78348 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC15.73■□□□□ 0.11
ASIC1P78348 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
ASIC1P78348 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
ASIC1P78348 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ASIC1P78348 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC15.72■□□□□ 0.11
ASIC1P78348 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC15.72■□□□□ 0.11
ASIC1P78348 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ASIC1P78348 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ASIC1P78348 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ASIC1P78348 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ASIC1P78348 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
ASIC1P78348 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ASIC1P78348 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
ASIC1P78348 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC15.72■□□□□ 0.11
ASIC1P78348 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ASIC1P78348 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ASIC1P78348 AC008620.2-201ENST00000510294 1569 ntBASIC15.72■□□□□ 0.11
ASIC1P78348 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ASIC1P78348 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ASIC1P78348 OR8T1P-201ENST00000421347 918 ntBASIC15.72■□□□□ 0.11
ASIC1P78348 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.72■□□□□ 0.11
ASIC1P78348 AC006033.1-201ENST00000440505 426 ntBASIC15.72■□□□□ 0.11
ASIC1P78348 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ASIC1P78348 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC15.72■□□□□ 0.11
ASIC1P78348 DUX4L50-201ENST00000455245 715 ntBASIC15.72■□□□□ 0.11
ASIC1P78348 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.72■□□□□ 0.11
ASIC1P78348 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.72■□□□□ 0.11
ASIC1P78348 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
ASIC1P78348 JPT2-214ENST00000569765 782 ntTSL 2 BASIC15.72■□□□□ 0.11
ASIC1P78348 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC15.72■□□□□ 0.11
ASIC1P78348 AL645939.5-201ENST00000606834 243 ntBASIC15.72■□□□□ 0.11
ASIC1P78348 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.72■□□□□ 0.11
ASIC1P78348 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ASIC1P78348 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ASIC1P78348 AL805961.1-203ENST00000641078 1258 ntBASIC15.72■□□□□ 0.11
ASIC1P78348 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ASIC1P78348 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ASIC1P78348 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ASIC1P78348 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ASIC1P78348 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ASIC1P78348 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ASIC1P78348 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ASIC1P78348 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ASIC1P78348 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ASIC1P78348 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.72■□□□□ 0.11
ASIC1P78348 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC15.72■□□□□ 0.11
ASIC1P78348 EML1-203ENST00000334192 4064 ntTSL 5 BASIC15.72■□□□□ 0.11
ASIC1P78348 FMO6P-201ENST00000236166 1620 ntBASIC15.72■□□□□ 0.11
ASIC1P78348 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ASIC1P78348 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ASIC1P78348 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC15.72■□□□□ 0.11
ASIC1P78348 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC15.72■□□□□ 0.11
ASIC1P78348 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC15.71■□□□□ 0.11
ASIC1P78348 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
ASIC1P78348 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ASIC1P78348 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ASIC1P78348 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms