Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SUMO3P55854 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
SUMO3P55854 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SUMO3P55854 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SUMO3P55854 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SUMO3P55854 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.7□□□□□ -0.38
SUMO3P55854 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SUMO3P55854 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SUMO3P55854 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SUMO3P55854 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SUMO3P55854 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SUMO3P55854 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SUMO3P55854 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
SUMO3P55854 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SUMO3P55854 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SUMO3P55854 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SUMO3P55854 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
SUMO3P55854 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC12.7□□□□□ -0.38
SUMO3P55854 AC005722.1-201ENST00000431878 964 ntBASIC12.7□□□□□ -0.38
SUMO3P55854 AC234782.1-201ENST00000451950 919 ntBASIC12.7□□□□□ -0.38
SUMO3P55854 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC12.7□□□□□ -0.38
SUMO3P55854 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SUMO3P55854 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC12.7□□□□□ -0.38
SUMO3P55854 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
SUMO3P55854 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC12.7□□□□□ -0.38
SUMO3P55854 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.7□□□□□ -0.38
SUMO3P55854 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC12.7□□□□□ -0.38
SUMO3P55854 FGFR3P5-201ENST00000564496 886 ntBASIC12.7□□□□□ -0.38
SUMO3P55854 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC12.7□□□□□ -0.38
SUMO3P55854 MIR3940-201ENST00000579148 102 ntBASIC12.7□□□□□ -0.38
SUMO3P55854 MIR4265-201ENST00000582152 99 ntBASIC12.7□□□□□ -0.38
SUMO3P55854 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.7□□□□□ -0.38
SUMO3P55854 AC097724.1-201ENST00000609581 426 ntBASIC12.7□□□□□ -0.38
SUMO3P55854 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC12.7□□□□□ -0.38
SUMO3P55854 GARS-210ENST00000627489 324 ntTSL 4 BASIC12.7□□□□□ -0.38
SUMO3P55854 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SUMO3P55854 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.7□□□□□ -0.38
SUMO3P55854 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.7□□□□□ -0.38
SUMO3P55854 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SUMO3P55854 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
SUMO3P55854 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SUMO3P55854 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.7□□□□□ -0.38
SUMO3P55854 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SUMO3P55854 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SUMO3P55854 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SUMO3P55854 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.7□□□□□ -0.38
SUMO3P55854 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC12.7□□□□□ -0.38
SUMO3P55854 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SUMO3P55854 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SUMO3P55854 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SUMO3P55854 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SUMO3P55854 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.69□□□□□ -0.38
SUMO3P55854 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SUMO3P55854 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SUMO3P55854 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SUMO3P55854 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC12.69□□□□□ -0.38
SUMO3P55854 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.69□□□□□ -0.38
SUMO3P55854 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.69□□□□□ -0.38
SUMO3P55854 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SUMO3P55854 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SUMO3P55854 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
SUMO3P55854 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SUMO3P55854 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SUMO3P55854 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SUMO3P55854 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SUMO3P55854 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SUMO3P55854 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.69□□□□□ -0.38
SUMO3P55854 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SUMO3P55854 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.69□□□□□ -0.38
SUMO3P55854 AC006372.4-201ENST00000624122 1543 ntBASIC12.69□□□□□ -0.38
SUMO3P55854 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SUMO3P55854 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SUMO3P55854 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.69□□□□□ -0.38
SUMO3P55854 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SUMO3P55854 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SUMO3P55854 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC12.69□□□□□ -0.38
SUMO3P55854 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.69□□□□□ -0.38
SUMO3P55854 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SUMO3P55854 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.69□□□□□ -0.38
SUMO3P55854 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC12.69□□□□□ -0.38
SUMO3P55854 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC12.69□□□□□ -0.38
SUMO3P55854 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC12.69□□□□□ -0.38
SUMO3P55854 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.69□□□□□ -0.38
SUMO3P55854 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC12.69□□□□□ -0.38
SUMO3P55854 AC018638.5-201ENST00000450885 754 ntBASIC12.69□□□□□ -0.38
SUMO3P55854 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC12.69□□□□□ -0.38
SUMO3P55854 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC12.69□□□□□ -0.38
SUMO3P55854 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SUMO3P55854 RN7SL767P-201ENST00000493013 295 ntBASIC12.69□□□□□ -0.38
SUMO3P55854 AC138701.2-201ENST00000553634 226 ntBASIC12.69□□□□□ -0.38
SUMO3P55854 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC12.69□□□□□ -0.38
SUMO3P55854 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC12.69□□□□□ -0.38
SUMO3P55854 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC12.69□□□□□ -0.38
SUMO3P55854 HPX-213ENST00000615166 826 ntTSL 5 BASIC12.69□□□□□ -0.38
SUMO3P55854 AC009145.4-201ENST00000625119 1294 ntBASIC12.69□□□□□ -0.38
SUMO3P55854 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC12.69□□□□□ -0.38
SUMO3P55854 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SUMO3P55854 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC12.69□□□□□ -0.38
SUMO3P55854 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SUMO3P55854 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms