Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CPT1AP50416 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.41■□□□□ 0.06
CPT1AP50416 HSPA7-201ENST00000445535 1927 ntBASIC15.41■□□□□ 0.06
CPT1AP50416 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPT1AP50416 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPT1AP50416 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CPT1AP50416 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPT1AP50416 AC104961.1-201ENST00000427605 771 ntBASIC15.41■□□□□ 0.06
CPT1AP50416 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC15.41■□□□□ 0.06
CPT1AP50416 SEPHS2P1-201ENST00000511618 1162 ntBASIC15.41■□□□□ 0.06
CPT1AP50416 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CPT1AP50416 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
CPT1AP50416 RN7SL605P-201ENST00000577229 281 ntBASIC15.41■□□□□ 0.06
CPT1AP50416 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPT1AP50416 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPT1AP50416 AL390755.1-201ENST00000623716 2027 ntBASIC15.41■□□□□ 0.06
CPT1AP50416 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPT1AP50416 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CPT1AP50416 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPT1AP50416 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
CPT1AP50416 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
CPT1AP50416 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CPT1AP50416 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.4■□□□□ 0.06
CPT1AP50416 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPT1AP50416 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPT1AP50416 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.4■□□□□ 0.06
CPT1AP50416 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPT1AP50416 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPT1AP50416 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPT1AP50416 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPT1AP50416 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
CPT1AP50416 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPT1AP50416 AC097359.2-201ENST00000604992 2389 ntBASIC15.4■□□□□ 0.06
CPT1AP50416 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPT1AP50416 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.4■□□□□ 0.06
CPT1AP50416 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CPT1AP50416 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPT1AP50416 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CPT1AP50416 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPT1AP50416 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPT1AP50416 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CPT1AP50416 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPT1AP50416 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPT1AP50416 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC15.4■□□□□ 0.06
CPT1AP50416 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPT1AP50416 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPT1AP50416 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC15.4■□□□□ 0.06
CPT1AP50416 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC15.4■□□□□ 0.06
CPT1AP50416 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC15.4■□□□□ 0.06
CPT1AP50416 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC15.4■□□□□ 0.06
CPT1AP50416 AC093462.1-201ENST00000621167 1683 ntBASIC15.4■□□□□ 0.06
CPT1AP50416 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPT1AP50416 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CPT1AP50416 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.4■□□□□ 0.06
CPT1AP50416 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.4■□□□□ 0.06
CPT1AP50416 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPT1AP50416 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.4■□□□□ 0.06
CPT1AP50416 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CPT1AP50416 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.4■□□□□ 0.06
CPT1AP50416 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
CPT1AP50416 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPT1AP50416 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.39■□□□□ 0.05
CPT1AP50416 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CPT1AP50416 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CPT1AP50416 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CPT1AP50416 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPT1AP50416 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.39■□□□□ 0.05
CPT1AP50416 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPT1AP50416 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPT1AP50416 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPT1AP50416 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPT1AP50416 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPT1AP50416 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CPT1AP50416 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.39■□□□□ 0.05
CPT1AP50416 GOLGA8EP-201ENST00000530246 1959 ntBASIC15.39■□□□□ 0.05
CPT1AP50416 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPT1AP50416 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPT1AP50416 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
CPT1AP50416 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPT1AP50416 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPT1AP50416 ACTBP7-201ENST00000418351 1124 ntBASIC15.39■□□□□ 0.05
CPT1AP50416 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC15.39■□□□□ 0.05
CPT1AP50416 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC15.39■□□□□ 0.05
CPT1AP50416 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CPT1AP50416 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC15.39■□□□□ 0.05
CPT1AP50416 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPT1AP50416 MIR5001-201ENST00000580185 100 ntBASIC15.39■□□□□ 0.05
CPT1AP50416 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC15.39■□□□□ 0.05
CPT1AP50416 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC15.39■□□□□ 0.05
CPT1AP50416 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC15.39■□□□□ 0.05
CPT1AP50416 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC15.39■□□□□ 0.05
CPT1AP50416 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPT1AP50416 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.39■□□□□ 0.05
CPT1AP50416 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPT1AP50416 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CPT1AP50416 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
CPT1AP50416 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CPT1AP50416 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.39■□□□□ 0.05
CPT1AP50416 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPT1AP50416 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms