Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 SNORD23-201ENST00000408876 110 ntBASIC15.55■□□□□ 0.08
TM4SF4P48230 HMGN1P4-201ENST00000419500 290 ntBASIC15.55■□□□□ 0.08
TM4SF4P48230 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC15.55■□□□□ 0.08
TM4SF4P48230 CXXC1P1-202ENST00000489409 1212 ntBASIC15.55■□□□□ 0.08
TM4SF4P48230 GOLGA2P10-201ENST00000550961 817 ntBASIC15.55■□□□□ 0.08
TM4SF4P48230 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC15.55■□□□□ 0.08
TM4SF4P48230 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC15.55■□□□□ 0.08
TM4SF4P48230 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC15.55■□□□□ 0.08
TM4SF4P48230 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC15.55■□□□□ 0.08
TM4SF4P48230 AC073592.10-201ENST00000624789 597 ntBASIC15.55■□□□□ 0.08
TM4SF4P48230 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC15.55■□□□□ 0.08
TM4SF4P48230 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM4SF4P48230 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM4SF4P48230 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TM4SF4P48230 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TM4SF4P48230 STK25-235ENST00000543554 2556 ntTSL 2 BASIC15.55■□□□□ 0.08
TM4SF4P48230 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TM4SF4P48230 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
TM4SF4P48230 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.55■□□□□ 0.08
TM4SF4P48230 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM4SF4P48230 DBET-201ENST00000630918 3363 ntBASIC15.55■□□□□ 0.08
TM4SF4P48230 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TM4SF4P48230 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TM4SF4P48230 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TM4SF4P48230 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC15.54■□□□□ 0.08
TM4SF4P48230 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TM4SF4P48230 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.54■□□□□ 0.08
TM4SF4P48230 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
TM4SF4P48230 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TM4SF4P48230 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TM4SF4P48230 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TM4SF4P48230 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TM4SF4P48230 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC15.54■□□□□ 0.08
TM4SF4P48230 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TM4SF4P48230 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC15.54■□□□□ 0.08
TM4SF4P48230 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TM4SF4P48230 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
TM4SF4P48230 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC15.54■□□□□ 0.08
TM4SF4P48230 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TM4SF4P48230 RN7SKP255-201ENST00000363442 313 ntBASIC15.54■□□□□ 0.08
TM4SF4P48230 RN7SKP203-201ENST00000363618 332 ntBASIC15.54■□□□□ 0.08
TM4SF4P48230 RN7SKP71-201ENST00000364558 318 ntBASIC15.54■□□□□ 0.08
TM4SF4P48230 7SK.1-201ENST00000365328 331 ntBASIC15.54■□□□□ 0.08
TM4SF4P48230 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TM4SF4P48230 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
TM4SF4P48230 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC15.54■□□□□ 0.08
TM4SF4P48230 FTLP3-201ENST00000427242 528 ntBASIC15.54■□□□□ 0.08
TM4SF4P48230 AP000343.1-201ENST00000440602 385 ntBASIC15.54■□□□□ 0.08
TM4SF4P48230 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC15.54■□□□□ 0.08
TM4SF4P48230 OR52X1P-201ENST00000446117 914 ntBASIC15.54■□□□□ 0.08
TM4SF4P48230 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC15.54■□□□□ 0.08
TM4SF4P48230 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TM4SF4P48230 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC15.54■□□□□ 0.08
TM4SF4P48230 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC15.54■□□□□ 0.08
TM4SF4P48230 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC15.54■□□□□ 0.08
TM4SF4P48230 AC239600.1-201ENST00000603201 462 ntBASIC15.54■□□□□ 0.08
TM4SF4P48230 AL589743.3-201ENST00000604121 517 ntBASIC15.54■□□□□ 0.08
TM4SF4P48230 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TM4SF4P48230 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC15.54■□□□□ 0.08
TM4SF4P48230 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TM4SF4P48230 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TM4SF4P48230 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TM4SF4P48230 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TM4SF4P48230 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TM4SF4P48230 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TM4SF4P48230 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TM4SF4P48230 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TM4SF4P48230 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TM4SF4P48230 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TM4SF4P48230 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TM4SF4P48230 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.54■□□□□ 0.08
TM4SF4P48230 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TM4SF4P48230 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TM4SF4P48230 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TM4SF4P48230 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TM4SF4P48230 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TM4SF4P48230 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TM4SF4P48230 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.53■□□□□ 0.08
TM4SF4P48230 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.53■□□□□ 0.08
TM4SF4P48230 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TM4SF4P48230 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TM4SF4P48230 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TM4SF4P48230 POLR3DP1-201ENST00000398689 1176 ntBASIC15.53■□□□□ 0.08
TM4SF4P48230 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC15.53■□□□□ 0.08
TM4SF4P48230 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TM4SF4P48230 RN7SL789P-201ENST00000478944 293 ntBASIC15.53■□□□□ 0.08
TM4SF4P48230 AC253536.5-201ENST00000506097 347 ntBASIC15.53■□□□□ 0.08
TM4SF4P48230 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC15.53■□□□□ 0.08
TM4SF4P48230 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC15.53■□□□□ 0.08
TM4SF4P48230 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TM4SF4P48230 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC15.53■□□□□ 0.08
TM4SF4P48230 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC15.53■□□□□ 0.08
TM4SF4P48230 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
TM4SF4P48230 FAM223B-202ENST00000598177 713 ntBASIC15.53■□□□□ 0.08
TM4SF4P48230 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TM4SF4P48230 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC15.53■□□□□ 0.08
TM4SF4P48230 FAM223A-202ENST00000625204 713 ntBASIC15.53■□□□□ 0.08
TM4SF4P48230 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TM4SF4P48230 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
TM4SF4P48230 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms