Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT2P35908 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT2P35908 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.12■□□□□ 0.17
KRT2P35908 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.12■□□□□ 0.17
KRT2P35908 SNORA50.1-201ENST00000628590 135 ntBASIC16.12■□□□□ 0.17
KRT2P35908 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT2P35908 AL133338.1-201ENST00000565695 1517 ntBASIC16.12■□□□□ 0.17
KRT2P35908 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT2P35908 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT2P35908 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT2P35908 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT2P35908 AC009474.1-201ENST00000455096 1565 ntBASIC16.12■□□□□ 0.17
KRT2P35908 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
KRT2P35908 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT2P35908 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC16.12■□□□□ 0.17
KRT2P35908 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT2P35908 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KRT2P35908 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
KRT2P35908 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KRT2P35908 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
KRT2P35908 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT2P35908 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC16.12■□□□□ 0.17
KRT2P35908 AGAP12P-201ENST00000585227 2359 ntBASIC16.12■□□□□ 0.17
KRT2P35908 AC126335.2-201ENST00000623362 4637 ntBASIC16.12■□□□□ 0.17
KRT2P35908 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT2P35908 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT2P35908 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT2P35908 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT2P35908 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC16.11■□□□□ 0.17
KRT2P35908 KRT8P31-201ENST00000504812 1408 ntBASIC16.11■□□□□ 0.17
KRT2P35908 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.11■□□□□ 0.17
KRT2P35908 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT2P35908 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT2P35908 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT2P35908 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT2P35908 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT2P35908 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT2P35908 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT2P35908 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT2P35908 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT2P35908 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
KRT2P35908 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT2P35908 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT2P35908 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT2P35908 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT2P35908 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT2P35908 AC005014.1-201ENST00000432006 2976 ntBASIC16.11■□□□□ 0.17
KRT2P35908 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT2P35908 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT2P35908 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.11■□□□□ 0.17
KRT2P35908 RN7SL258P-201ENST00000478664 300 ntBASIC16.11■□□□□ 0.17
KRT2P35908 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT2P35908 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC16.11■□□□□ 0.17
KRT2P35908 AC114947.1-202ENST00000514136 344 ntBASIC16.11■□□□□ 0.17
KRT2P35908 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
KRT2P35908 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT2P35908 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.11■□□□□ 0.17
KRT2P35908 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT2P35908 AC103810.3-201ENST00000583567 96 ntBASIC16.11■□□□□ 0.17
KRT2P35908 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT2P35908 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
KRT2P35908 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.11■□□□□ 0.17
KRT2P35908 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
KRT2P35908 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT2P35908 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC16.11■□□□□ 0.17
KRT2P35908 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT2P35908 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
KRT2P35908 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
KRT2P35908 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC16.11■□□□□ 0.17
KRT2P35908 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT2P35908 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
KRT2P35908 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT2P35908 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT2P35908 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
KRT2P35908 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT2P35908 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT2P35908 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT2P35908 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT2P35908 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC16.1■□□□□ 0.17
KRT2P35908 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
KRT2P35908 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
KRT2P35908 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT2P35908 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
KRT2P35908 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT2P35908 AL359845.1-201ENST00000458202 1648 ntBASIC16.1■□□□□ 0.17
KRT2P35908 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT2P35908 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.1■□□□□ 0.17
KRT2P35908 AC026320.2-201ENST00000434379 478 ntBASIC16.1■□□□□ 0.17
KRT2P35908 AL353637.1-201ENST00000451571 732 ntBASIC16.1■□□□□ 0.17
KRT2P35908 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms