Protein–RNA interactions for Protein: P26583

HMGB2, High mobility group protein B2, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2P26583 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMGB2P26583 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMGB2P26583 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMGB2P26583 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC17.33■□□□□ 0.37
HMGB2P26583 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
HMGB2P26583 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HMGB2P26583 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HMGB2P26583 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HMGB2P26583 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HMGB2P26583 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC17.33■□□□□ 0.36
HMGB2P26583 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.33■□□□□ 0.36
HMGB2P26583 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HMGB2P26583 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMGB2P26583 AC024475.2-201ENST00000312173 879 ntBASIC17.33■□□□□ 0.36
HMGB2P26583 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC17.33■□□□□ 0.36
HMGB2P26583 CRIP1P2-201ENST00000425396 228 ntBASIC17.33■□□□□ 0.36
HMGB2P26583 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC17.33■□□□□ 0.36
HMGB2P26583 FAM86JP-202ENST00000484500 988 ntBASIC17.33■□□□□ 0.36
HMGB2P26583 RPL29P2-202ENST00000498671 657 ntBASIC17.33■□□□□ 0.36
HMGB2P26583 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC17.33■□□□□ 0.36
HMGB2P26583 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC17.33■□□□□ 0.36
HMGB2P26583 AP000553.2-201ENST00000609038 441 ntBASIC17.33■□□□□ 0.36
HMGB2P26583 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC17.33■□□□□ 0.36
HMGB2P26583 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
HMGB2P26583 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.33■□□□□ 0.36
HMGB2P26583 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGB2P26583 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
HMGB2P26583 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC17.33■□□□□ 0.36
HMGB2P26583 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.33■□□□□ 0.36
HMGB2P26583 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.33■□□□□ 0.36
HMGB2P26583 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
HMGB2P26583 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGB2P26583 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGB2P26583 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
HMGB2P26583 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMGB2P26583 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMGB2P26583 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC17.33■□□□□ 0.36
HMGB2P26583 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGB2P26583 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HMGB2P26583 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
HMGB2P26583 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.32■□□□□ 0.36
HMGB2P26583 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGB2P26583 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HMGB2P26583 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HMGB2P26583 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGB2P26583 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HMGB2P26583 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HMGB2P26583 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGB2P26583 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGB2P26583 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC17.32■□□□□ 0.36
HMGB2P26583 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGB2P26583 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGB2P26583 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
HMGB2P26583 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGB2P26583 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
HMGB2P26583 RPL4P6-201ENST00000438116 1304 ntBASIC17.32■□□□□ 0.36
HMGB2P26583 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGB2P26583 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGB2P26583 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HMGB2P26583 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMGB2P26583 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGB2P26583 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGB2P26583 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMGB2P26583 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
HMGB2P26583 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGB2P26583 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMGB2P26583 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC17.32■□□□□ 0.36
HMGB2P26583 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC17.32■□□□□ 0.36
HMGB2P26583 MIR4640-201ENST00000581824 90 ntBASIC17.32■□□□□ 0.36
HMGB2P26583 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC17.32■□□□□ 0.36
HMGB2P26583 CR392039.2-201ENST00000623182 509 ntBASIC17.32■□□□□ 0.36
HMGB2P26583 TCAF2P1-201ENST00000291129 2421 ntBASIC17.32■□□□□ 0.36
HMGB2P26583 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGB2P26583 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
HMGB2P26583 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HMGB2P26583 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGB2P26583 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HMGB2P26583 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMGB2P26583 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMGB2P26583 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
HMGB2P26583 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGB2P26583 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
HMGB2P26583 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HMGB2P26583 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC17.31■□□□□ 0.36
HMGB2P26583 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC17.31■□□□□ 0.36
HMGB2P26583 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMGB2P26583 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.31■□□□□ 0.36
HMGB2P26583 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGB2P26583 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGB2P26583 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.31■□□□□ 0.36
HMGB2P26583 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMGB2P26583 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HMGB2P26583 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HMGB2P26583 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGB2P26583 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGB2P26583 RPSAP61-201ENST00000412542 878 ntBASIC17.31■□□□□ 0.36
HMGB2P26583 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGB2P26583 PTPA-219ENST00000435305 530 ntTSL 2 BASIC17.31■□□□□ 0.36
HMGB2P26583 AC006328.1-201ENST00000437571 379 ntBASIC17.31■□□□□ 0.36
HMGB2P26583 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms