Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 MIR645-201ENST00000385283 94 ntBASIC14.25□□□□□ -0.13
XPAP23025 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.25□□□□□ -0.13
XPAP23025 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
XPAP23025 FTH1P22-201ENST00000456305 520 ntBASIC14.25□□□□□ -0.13
XPAP23025 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.25□□□□□ -0.13
XPAP23025 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
XPAP23025 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
XPAP23025 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
XPAP23025 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.25□□□□□ -0.13
XPAP23025 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.25□□□□□ -0.13
XPAP23025 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.25□□□□□ -0.13
XPAP23025 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.25□□□□□ -0.13
XPAP23025 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
XPAP23025 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
XPAP23025 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
XPAP23025 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
XPAP23025 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
XPAP23025 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.25□□□□□ -0.13
XPAP23025 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.25□□□□□ -0.13
XPAP23025 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
XPAP23025 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
XPAP23025 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
XPAP23025 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
XPAP23025 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.25□□□□□ -0.13
XPAP23025 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
XPAP23025 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.25□□□□□ -0.13
XPAP23025 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.24□□□□□ -0.13
XPAP23025 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.24□□□□□ -0.13
XPAP23025 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.24□□□□□ -0.13
XPAP23025 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.24□□□□□ -0.13
XPAP23025 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
XPAP23025 AC026748.1-201ENST00000624349 3251 ntBASIC14.24□□□□□ -0.13
XPAP23025 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.24□□□□□ -0.13
XPAP23025 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
XPAP23025 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
XPAP23025 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.24□□□□□ -0.13
XPAP23025 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 BX679664.3-201ENST00000414070 555 ntBASIC14.24□□□□□ -0.13
XPAP23025 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14.24□□□□□ -0.13
XPAP23025 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.24□□□□□ -0.13
XPAP23025 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.24□□□□□ -0.13
XPAP23025 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.24□□□□□ -0.13
XPAP23025 FGFR3P1-201ENST00000449999 601 ntBASIC14.24□□□□□ -0.13
XPAP23025 CHCHD2P9-201ENST00000461726 456 ntBASIC14.24□□□□□ -0.13
XPAP23025 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.24□□□□□ -0.13
XPAP23025 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 AC113935.1-201ENST00000471722 555 ntBASIC14.24□□□□□ -0.13
XPAP23025 RPL18AP8-201ENST00000486071 528 ntBASIC14.24□□□□□ -0.13
XPAP23025 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
XPAP23025 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
XPAP23025 AC138701.2-201ENST00000553634 226 ntBASIC14.24□□□□□ -0.13
XPAP23025 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.24□□□□□ -0.13
XPAP23025 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.24□□□□□ -0.13
XPAP23025 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.24□□□□□ -0.13
XPAP23025 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.24□□□□□ -0.13
XPAP23025 AL133467.4-201ENST00000602953 725 ntBASIC14.24□□□□□ -0.13
XPAP23025 AC103691.2-201ENST00000618824 433 ntBASIC14.24□□□□□ -0.13
XPAP23025 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 AL139158.3-201ENST00000641212 1562 ntBASIC14.24□□□□□ -0.13
XPAP23025 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
XPAP23025 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.24□□□□□ -0.13
XPAP23025 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
XPAP23025 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.24□□□□□ -0.13
XPAP23025 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
XPAP23025 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
XPAP23025 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
XPAP23025 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
XPAP23025 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
XPAP23025 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.23□□□□□ -0.13
XPAP23025 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
XPAP23025 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
XPAP23025 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
XPAP23025 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
XPAP23025 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms