Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLTAP09496 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLTAP09496 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
CLTAP09496 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLTAP09496 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLTAP09496 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLTAP09496 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CLTAP09496 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
CLTAP09496 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CLTAP09496 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CLTAP09496 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
CLTAP09496 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CLTAP09496 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
CLTAP09496 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CLTAP09496 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC15.46■□□□□ 0.06
CLTAP09496 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
CLTAP09496 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CLTAP09496 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.06
CLTAP09496 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.46■□□□□ 0.06
CLTAP09496 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CLTAP09496 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
CLTAP09496 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.45■□□□□ 0.06
CLTAP09496 AL590824.1-201ENST00000403828 1349 ntBASIC15.45■□□□□ 0.06
CLTAP09496 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC15.45■□□□□ 0.06
CLTAP09496 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 AC011474.4-201ENST00000623523 2076 ntBASIC15.45■□□□□ 0.06
CLTAP09496 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CLTAP09496 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CLTAP09496 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CLTAP09496 AL627231.1-201ENST00000394467 1125 ntBASIC15.45■□□□□ 0.06
CLTAP09496 AC006987.1-201ENST00000413610 527 ntBASIC15.45■□□□□ 0.06
CLTAP09496 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 AL592076.1-201ENST00000424448 303 ntBASIC15.45■□□□□ 0.06
CLTAP09496 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.45■□□□□ 0.06
CLTAP09496 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.45■□□□□ 0.06
CLTAP09496 MAGEA5-201ENST00000446757 942 ntBASIC15.45■□□□□ 0.06
CLTAP09496 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.45■□□□□ 0.06
CLTAP09496 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 CHCHD2P2-201ENST00000503744 321 ntBASIC15.45■□□□□ 0.06
CLTAP09496 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.45■□□□□ 0.06
CLTAP09496 AC007326.1-201ENST00000604539 458 ntBASIC15.45■□□□□ 0.06
CLTAP09496 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.45■□□□□ 0.06
CLTAP09496 AC009560.1-201ENST00000620208 434 ntBASIC15.45■□□□□ 0.06
CLTAP09496 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CLTAP09496 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CLTAP09496 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.45■□□□□ 0.06
CLTAP09496 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.45■□□□□ 0.06
CLTAP09496 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.45■□□□□ 0.06
CLTAP09496 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CLTAP09496 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.44■□□□□ 0.06
CLTAP09496 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CLTAP09496 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLTAP09496 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLTAP09496 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLTAP09496 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.44■□□□□ 0.06
CLTAP09496 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CLTAP09496 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.44■□□□□ 0.06
CLTAP09496 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC15.44■□□□□ 0.06
CLTAP09496 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15.44■□□□□ 0.06
CLTAP09496 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLTAP09496 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLTAP09496 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLTAP09496 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.44■□□□□ 0.06
CLTAP09496 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CLTAP09496 AL807761.2-201ENST00000422849 729 ntBASIC15.44■□□□□ 0.06
CLTAP09496 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.44■□□□□ 0.06
CLTAP09496 EEF1DP6-201ENST00000449232 372 ntBASIC15.44■□□□□ 0.06
CLTAP09496 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.44■□□□□ 0.06
CLTAP09496 GOLGA2P8-201ENST00000505201 779 ntBASIC15.44■□□□□ 0.06
CLTAP09496 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms