Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
GAPDHP04406 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC11.87□□□□□ -0.51
GAPDHP04406 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC11.87□□□□□ -0.51
GAPDHP04406 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
GAPDHP04406 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
GAPDHP04406 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC11.87□□□□□ -0.51
GAPDHP04406 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC11.87□□□□□ -0.51
GAPDHP04406 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC11.86□□□□□ -0.51
GAPDHP04406 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC11.86□□□□□ -0.51
GAPDHP04406 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 AL445209.1-201ENST00000607269 3491 ntBASIC11.86□□□□□ -0.51
GAPDHP04406 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
GAPDHP04406 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
GAPDHP04406 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC11.86□□□□□ -0.51
GAPDHP04406 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC11.86□□□□□ -0.51
GAPDHP04406 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
GAPDHP04406 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
GAPDHP04406 TISP43-201ENST00000409793 538 ntTSL 4 BASIC11.86□□□□□ -0.51
GAPDHP04406 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC11.86□□□□□ -0.51
GAPDHP04406 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC11.86□□□□□ -0.51
GAPDHP04406 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC11.86□□□□□ -0.51
GAPDHP04406 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC11.86□□□□□ -0.51
GAPDHP04406 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC11.86□□□□□ -0.51
GAPDHP04406 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC11.86□□□□□ -0.51
GAPDHP04406 AC100827.2-201ENST00000563214 1194 ntBASIC11.86□□□□□ -0.51
GAPDHP04406 AC132192.2-201ENST00000596206 1147 ntBASIC11.86□□□□□ -0.51
GAPDHP04406 AC009884.2-201ENST00000603110 324 ntBASIC11.86□□□□□ -0.51
GAPDHP04406 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC11.86□□□□□ -0.51
GAPDHP04406 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC11.86□□□□□ -0.51
GAPDHP04406 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC11.86□□□□□ -0.51
GAPDHP04406 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC11.86□□□□□ -0.51
GAPDHP04406 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC11.86□□□□□ -0.51
GAPDHP04406 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC11.86□□□□□ -0.51
GAPDHP04406 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC11.86□□□□□ -0.51
GAPDHP04406 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC11.86□□□□□ -0.51
GAPDHP04406 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC11.86□□□□□ -0.51
GAPDHP04406 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC11.86□□□□□ -0.51
GAPDHP04406 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
GAPDHP04406 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
GAPDHP04406 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
GAPDHP04406 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
GAPDHP04406 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
GAPDHP04406 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
GAPDHP04406 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC11.85□□□□□ -0.51
GAPDHP04406 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC11.85□□□□□ -0.51
GAPDHP04406 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
GAPDHP04406 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
GAPDHP04406 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC11.85□□□□□ -0.51
GAPDHP04406 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
GAPDHP04406 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
GAPDHP04406 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
GAPDHP04406 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
GAPDHP04406 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
GAPDHP04406 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
GAPDHP04406 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
GAPDHP04406 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC11.85□□□□□ -0.51
GAPDHP04406 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
GAPDHP04406 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
GAPDHP04406 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
GAPDHP04406 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC11.85□□□□□ -0.51
GAPDHP04406 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC11.85□□□□□ -0.51
GAPDHP04406 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
GAPDHP04406 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
GAPDHP04406 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
GAPDHP04406 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
GAPDHP04406 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC11.85□□□□□ -0.51
GAPDHP04406 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
GAPDHP04406 Z93015.1-201ENST00000451718 390 ntBASIC11.85□□□□□ -0.51
GAPDHP04406 IGHVIII-5-2-201ENST00000522505 261 ntBASIC11.85□□□□□ -0.51
GAPDHP04406 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms