Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.87□□□□□ -0.03
TIMP1P01033 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC14.87□□□□□ -0.03
TIMP1P01033 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TIMP1P01033 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC14.87□□□□□ -0.03
TIMP1P01033 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC14.87□□□□□ -0.03
TIMP1P01033 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.87□□□□□ -0.03
TIMP1P01033 HNRNPA1P3-201ENST00000440968 551 ntBASIC14.87□□□□□ -0.03
TIMP1P01033 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.87□□□□□ -0.03
TIMP1P01033 AC053503.3-201ENST00000448375 114 ntBASIC14.87□□□□□ -0.03
TIMP1P01033 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC14.87□□□□□ -0.03
TIMP1P01033 YBX1P3-201ENST00000468366 909 ntBASIC14.87□□□□□ -0.03
TIMP1P01033 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TIMP1P01033 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC14.87□□□□□ -0.03
TIMP1P01033 CCNL2P1-201ENST00000512846 969 ntBASIC14.87□□□□□ -0.03
TIMP1P01033 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC14.87□□□□□ -0.03
TIMP1P01033 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
TIMP1P01033 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC14.87□□□□□ -0.03
TIMP1P01033 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC14.87□□□□□ -0.03
TIMP1P01033 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC14.87□□□□□ -0.03
TIMP1P01033 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC14.87□□□□□ -0.03
TIMP1P01033 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC14.87□□□□□ -0.03
TIMP1P01033 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC14.87□□□□□ -0.03
TIMP1P01033 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC14.87□□□□□ -0.03
TIMP1P01033 Z82244.2-201ENST00000632196 448 ntBASIC14.87□□□□□ -0.03
TIMP1P01033 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TIMP1P01033 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TIMP1P01033 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TIMP1P01033 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
TIMP1P01033 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TIMP1P01033 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.87□□□□□ -0.03
TIMP1P01033 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TIMP1P01033 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
TIMP1P01033 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TIMP1P01033 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TIMP1P01033 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TIMP1P01033 AC008038.1-201ENST00000634247 1314 ntBASIC14.87□□□□□ -0.03
TIMP1P01033 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.87□□□□□ -0.03
TIMP1P01033 AC040160.2-201ENST00000623816 1675 ntBASIC14.87□□□□□ -0.03
TIMP1P01033 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TIMP1P01033 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.87□□□□□ -0.03
TIMP1P01033 AC105917.1-201ENST00000506637 2539 ntBASIC14.87□□□□□ -0.03
TIMP1P01033 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TIMP1P01033 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TIMP1P01033 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TIMP1P01033 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
TIMP1P01033 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMP1P01033 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC14.86□□□□□ -0.03
TIMP1P01033 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TIMP1P01033 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TIMP1P01033 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TIMP1P01033 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TIMP1P01033 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMP1P01033 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.86□□□□□ -0.03
TIMP1P01033 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMP1P01033 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMP1P01033 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC14.86□□□□□ -0.03
TIMP1P01033 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
TIMP1P01033 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC14.86□□□□□ -0.03
TIMP1P01033 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC14.86□□□□□ -0.03
TIMP1P01033 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TIMP1P01033 AC005077.3-201ENST00000449614 213 ntBASIC14.86□□□□□ -0.03
TIMP1P01033 RNASEH2CP1-201ENST00000454281 502 ntBASIC14.86□□□□□ -0.03
TIMP1P01033 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC14.86□□□□□ -0.03
TIMP1P01033 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.86□□□□□ -0.03
TIMP1P01033 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC14.86□□□□□ -0.03
TIMP1P01033 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC14.86□□□□□ -0.03
TIMP1P01033 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC14.86□□□□□ -0.03
TIMP1P01033 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TIMP1P01033 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC14.86□□□□□ -0.03
TIMP1P01033 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC14.86□□□□□ -0.03
TIMP1P01033 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC14.86□□□□□ -0.03
TIMP1P01033 AC091691.1-201ENST00000583587 1018 ntBASIC14.86□□□□□ -0.03
TIMP1P01033 AC139100.2-201ENST00000616901 662 ntBASIC14.86□□□□□ -0.03
TIMP1P01033 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TIMP1P01033 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TIMP1P01033 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TIMP1P01033 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMP1P01033 AC046158.3-201ENST00000624947 2558 ntBASIC14.86□□□□□ -0.03
TIMP1P01033 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMP1P01033 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMP1P01033 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMP1P01033 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TIMP1P01033 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMP1P01033 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMP1P01033 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.86□□□□□ -0.03
TIMP1P01033 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMP1P01033 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TIMP1P01033 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMP1P01033 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMP1P01033 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
TIMP1P01033 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMP1P01033 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.86□□□□□ -0.03
TIMP1P01033 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.86□□□□□ -0.03
TIMP1P01033 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TIMP1P01033 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TIMP1P01033 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TIMP1P01033 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TIMP1P01033 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TIMP1P01033 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TIMP1P01033 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms