Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC026803.1-201ENST00000569130 274 ntBASIC12.62□□□□□ -0.39
CNOT4O95628 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.62□□□□□ -0.39
CNOT4O95628 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC12.62□□□□□ -0.39
CNOT4O95628 AC012044.1-201ENST00000603431 297 ntBASIC12.62□□□□□ -0.39
CNOT4O95628 AF254983.2-201ENST00000612331 135 ntBASIC12.62□□□□□ -0.39
CNOT4O95628 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC12.62□□□□□ -0.39
CNOT4O95628 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.62□□□□□ -0.39
CNOT4O95628 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.62□□□□□ -0.39
CNOT4O95628 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNOT4O95628 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNOT4O95628 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNOT4O95628 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNOT4O95628 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNOT4O95628 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.62□□□□□ -0.39
CNOT4O95628 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.62□□□□□ -0.39
CNOT4O95628 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.62□□□□□ -0.39
CNOT4O95628 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.62□□□□□ -0.39
CNOT4O95628 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNOT4O95628 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CNOT4O95628 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNOT4O95628 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.62□□□□□ -0.39
CNOT4O95628 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNOT4O95628 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNOT4O95628 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CNOT4O95628 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNOT4O95628 KRT8P31-201ENST00000504812 1408 ntBASIC12.62□□□□□ -0.39
CNOT4O95628 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.62□□□□□ -0.39
CNOT4O95628 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNOT4O95628 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CNOT4O95628 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CNOT4O95628 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNOT4O95628 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CNOT4O95628 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.61□□□□□ -0.39
CNOT4O95628 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
CNOT4O95628 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.61□□□□□ -0.39
CNOT4O95628 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.61□□□□□ -0.39
CNOT4O95628 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CNOT4O95628 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.61□□□□□ -0.39
CNOT4O95628 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.61□□□□□ -0.39
CNOT4O95628 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CNOT4O95628 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.61□□□□□ -0.39
CNOT4O95628 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.61□□□□□ -0.39
CNOT4O95628 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12.61□□□□□ -0.39
CNOT4O95628 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
CNOT4O95628 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC12.61□□□□□ -0.39
CNOT4O95628 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.61□□□□□ -0.39
CNOT4O95628 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC12.61□□□□□ -0.39
CNOT4O95628 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.61□□□□□ -0.39
CNOT4O95628 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.61□□□□□ -0.39
CNOT4O95628 RPSAP15-201ENST00000448168 861 ntBASIC12.61□□□□□ -0.39
CNOT4O95628 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 RN7SL818P-201ENST00000485099 259 ntBASIC12.61□□□□□ -0.39
CNOT4O95628 IGLV3-15-201ENST00000518356 244 ntBASIC12.61□□□□□ -0.39
CNOT4O95628 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
CNOT4O95628 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.61□□□□□ -0.39
CNOT4O95628 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC12.61□□□□□ -0.39
CNOT4O95628 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC12.61□□□□□ -0.39
CNOT4O95628 RN7SL555P-201ENST00000584742 339 ntBASIC12.61□□□□□ -0.39
CNOT4O95628 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.61□□□□□ -0.39
CNOT4O95628 RN7SL725P-201ENST00000606439 259 ntBASIC12.61□□□□□ -0.39
CNOT4O95628 AC018635.2-201ENST00000608625 364 ntBASIC12.61□□□□□ -0.39
CNOT4O95628 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
CNOT4O95628 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.61□□□□□ -0.39
CNOT4O95628 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CNOT4O95628 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CNOT4O95628 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.61□□□□□ -0.39
CNOT4O95628 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 AP001267.2-201ENST00000532619 2086 ntBASIC12.61□□□□□ -0.39
CNOT4O95628 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
CNOT4O95628 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.61□□□□□ -0.39
CNOT4O95628 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CNOT4O95628 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms