Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RFPL1O75677 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RFPL1O75677 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC14.18□□□□□ -0.14
RFPL1O75677 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RFPL1O75677 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RFPL1O75677 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RFPL1O75677 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RFPL1O75677 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC14.18□□□□□ -0.14
RFPL1O75677 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.18□□□□□ -0.14
RFPL1O75677 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.18□□□□□ -0.14
RFPL1O75677 AL023775.1-201ENST00000454907 1746 ntBASIC14.18□□□□□ -0.14
RFPL1O75677 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RFPL1O75677 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.18□□□□□ -0.14
RFPL1O75677 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RFPL1O75677 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RFPL1O75677 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
RFPL1O75677 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.17□□□□□ -0.14
RFPL1O75677 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 LINC00638-201ENST00000555578 2518 ntBASIC14.17□□□□□ -0.14
RFPL1O75677 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
RFPL1O75677 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
RFPL1O75677 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
RFPL1O75677 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.17□□□□□ -0.14
RFPL1O75677 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RFPL1O75677 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
RFPL1O75677 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC14.17□□□□□ -0.14
RFPL1O75677 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RFPL1O75677 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RFPL1O75677 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RFPL1O75677 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RFPL1O75677 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.17□□□□□ -0.14
RFPL1O75677 KLF2P1-201ENST00000447438 1042 ntBASIC14.17□□□□□ -0.14
RFPL1O75677 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.17□□□□□ -0.14
RFPL1O75677 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.17□□□□□ -0.14
RFPL1O75677 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
RFPL1O75677 AC003686.1-201ENST00000550956 1034 ntBASIC14.17□□□□□ -0.14
RFPL1O75677 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.17□□□□□ -0.14
RFPL1O75677 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.17□□□□□ -0.14
RFPL1O75677 AC009955.4-201ENST00000597192 544 ntBASIC14.17□□□□□ -0.14
RFPL1O75677 AC244157.2-201ENST00000616239 1006 ntBASIC14.17□□□□□ -0.14
RFPL1O75677 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RFPL1O75677 Z98259.2-201ENST00000641583 609 ntBASIC14.17□□□□□ -0.14
RFPL1O75677 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC14.17□□□□□ -0.14
RFPL1O75677 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 AC010970.1-201ENST00000445125 1848 ntBASIC14.17□□□□□ -0.14
RFPL1O75677 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC14.17□□□□□ -0.14
RFPL1O75677 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RFPL1O75677 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RFPL1O75677 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.16□□□□□ -0.14
RFPL1O75677 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RFPL1O75677 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RFPL1O75677 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RFPL1O75677 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RFPL1O75677 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.16□□□□□ -0.14
RFPL1O75677 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RFPL1O75677 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RFPL1O75677 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RFPL1O75677 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC14.16□□□□□ -0.14
RFPL1O75677 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RFPL1O75677 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RFPL1O75677 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
RFPL1O75677 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RFPL1O75677 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RFPL1O75677 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RFPL1O75677 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RFPL1O75677 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RFPL1O75677 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.16□□□□□ -0.14
RFPL1O75677 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.16□□□□□ -0.14
RFPL1O75677 EIF4HP1-201ENST00000453115 687 ntBASIC14.16□□□□□ -0.14
RFPL1O75677 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.16□□□□□ -0.14
RFPL1O75677 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RFPL1O75677 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.16□□□□□ -0.14
RFPL1O75677 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RFPL1O75677 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms