Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NCDNQ9UBB6 AJ011931.1-201ENST00000618749 2492 ntBASIC13.95□□□□□ -0.18
NCDNQ9UBB6 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 AC020931.1-201ENST00000589622 1346 ntBASIC13.94□□□□□ -0.18
NCDNQ9UBB6 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 LAP3P2-201ENST00000454686 1454 ntBASIC13.94□□□□□ -0.18
NCDNQ9UBB6 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 AC097376.2-205ENST00000610159 5334 ntBASIC13.94□□□□□ -0.18
NCDNQ9UBB6 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 OR10N1P-201ENST00000392758 869 ntBASIC13.94□□□□□ -0.18
NCDNQ9UBB6 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 GGTLC4P-201ENST00000402176 664 ntBASIC13.94□□□□□ -0.18
NCDNQ9UBB6 BX679664.3-201ENST00000414070 555 ntBASIC13.94□□□□□ -0.18
NCDNQ9UBB6 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 AC092573.1-201ENST00000433054 884 ntBASIC13.94□□□□□ -0.18
NCDNQ9UBB6 AC113935.1-201ENST00000471722 555 ntBASIC13.94□□□□□ -0.18
NCDNQ9UBB6 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 AC090820.1-201ENST00000519722 591 ntBASIC13.94□□□□□ -0.18
NCDNQ9UBB6 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 ESR1-214ENST00000638569 132 ntTSL 5 BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 AC005089.1-201ENST00000619486 2241 ntBASIC13.94□□□□□ -0.18
NCDNQ9UBB6 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NCDNQ9UBB6 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 SSR4-202ENST00000370085 526 ntTSL 2 BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 SNRPCP15-201ENST00000424055 192 ntBASIC13.93□□□□□ -0.18
NCDNQ9UBB6 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 AC025594.1-201ENST00000469533 543 ntBASIC13.93□□□□□ -0.18
NCDNQ9UBB6 AC004923.3-201ENST00000527532 355 ntBASIC13.93□□□□□ -0.18
NCDNQ9UBB6 INO80E-209ENST00000567254 625 ntTSL 2 BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 AC132812.1-201ENST00000583145 892 ntBASIC13.93□□□□□ -0.18
NCDNQ9UBB6 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 CSTP2-201ENST00000610599 398 ntBASIC13.93□□□□□ -0.18
NCDNQ9UBB6 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NCDNQ9UBB6 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 193.7 ms