Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 AL355102.3-201ENST00000554299 1678 ntBASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 HLA-V-201ENST00000429037 534 ntBASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 AL160314.3-201ENST00000556041 767 ntBASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 EEF1DP1-201ENST00000585891 896 ntBASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 AL445250.1-201ENST00000641671 2259 ntBASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.32□□□□□ -0.28
THUMPD1Q9NXG2 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 AC026954.1-201ENST00000429771 1293 ntBASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 MIR3197-201ENST00000582241 73 ntBASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 MIR193BHG-211ENST00000641433 5365 ntBASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.31□□□□□ -0.28
THUMPD1Q9NXG2 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
THUMPD1Q9NXG2 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms