Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VGLL1Q99990 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC10.78□□□□□ -0.68
VGLL1Q99990 PCDHB18P-202ENST00000526308 3197 ntBASIC10.78□□□□□ -0.68
VGLL1Q99990 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC10.78□□□□□ -0.68
VGLL1Q99990 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VGLL1Q99990 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC10.78□□□□□ -0.68
VGLL1Q99990 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC10.78□□□□□ -0.68
VGLL1Q99990 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VGLL1Q99990 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC10.78□□□□□ -0.68
VGLL1Q99990 FAS-202ENST00000352159 1722 ntTSL 5 BASIC10.78□□□□□ -0.68
VGLL1Q99990 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VGLL1Q99990 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VGLL1Q99990 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VGLL1Q99990 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC10.78□□□□□ -0.68
VGLL1Q99990 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VGLL1Q99990 AC009474.1-201ENST00000455096 1565 ntBASIC10.77□□□□□ -0.68
VGLL1Q99990 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
VGLL1Q99990 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC10.77□□□□□ -0.68
VGLL1Q99990 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
VGLL1Q99990 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
VGLL1Q99990 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
VGLL1Q99990 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC10.77□□□□□ -0.68
VGLL1Q99990 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
VGLL1Q99990 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
VGLL1Q99990 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
VGLL1Q99990 TRIM80P-201ENST00000455685 2848 ntBASIC10.77□□□□□ -0.68
VGLL1Q99990 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
VGLL1Q99990 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC10.77□□□□□ -0.68
VGLL1Q99990 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
VGLL1Q99990 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
VGLL1Q99990 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC10.77□□□□□ -0.68
VGLL1Q99990 AL445250.1-201ENST00000641671 2259 ntBASIC10.77□□□□□ -0.69
VGLL1Q99990 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
VGLL1Q99990 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
VGLL1Q99990 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC10.77□□□□□ -0.69
VGLL1Q99990 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
VGLL1Q99990 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
VGLL1Q99990 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VGLL1Q99990 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
VGLL1Q99990 AC092933.1-201ENST00000393644 945 ntBASIC10.77□□□□□ -0.69
VGLL1Q99990 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
VGLL1Q99990 AP006294.1-201ENST00000415407 339 ntBASIC10.77□□□□□ -0.69
VGLL1Q99990 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC10.77□□□□□ -0.69
VGLL1Q99990 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC10.77□□□□□ -0.69
VGLL1Q99990 SLC25A47P1-201ENST00000531577 414 ntBASIC10.77□□□□□ -0.69
VGLL1Q99990 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
VGLL1Q99990 GREM1-201ENST00000560677 623 ntTSL 4 BASIC10.77□□□□□ -0.69
VGLL1Q99990 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
VGLL1Q99990 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
VGLL1Q99990 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC10.77□□□□□ -0.69
VGLL1Q99990 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC10.77□□□□□ -0.69
VGLL1Q99990 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
VGLL1Q99990 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
VGLL1Q99990 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
VGLL1Q99990 LINC00567-201ENST00000569854 3409 ntBASIC10.77□□□□□ -0.69
VGLL1Q99990 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VGLL1Q99990 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
VGLL1Q99990 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
VGLL1Q99990 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC10.77□□□□□ -0.69
VGLL1Q99990 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VGLL1Q99990 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VGLL1Q99990 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
VGLL1Q99990 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
VGLL1Q99990 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
VGLL1Q99990 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
VGLL1Q99990 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
VGLL1Q99990 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
VGLL1Q99990 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
VGLL1Q99990 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
VGLL1Q99990 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
VGLL1Q99990 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
VGLL1Q99990 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
VGLL1Q99990 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC10.77□□□□□ -0.69
VGLL1Q99990 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 AC125807.2-201ENST00000513358 3514 ntBASIC10.76□□□□□ -0.69
VGLL1Q99990 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 AC004623.1-201ENST00000624592 2127 ntBASIC10.76□□□□□ -0.69
VGLL1Q99990 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
VGLL1Q99990 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC10.76□□□□□ -0.69
VGLL1Q99990 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
VGLL1Q99990 SHC1P1-201ENST00000425230 1745 ntBASIC10.76□□□□□ -0.69
VGLL1Q99990 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
VGLL1Q99990 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC10.76□□□□□ -0.69
VGLL1Q99990 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC10.76□□□□□ -0.69
VGLL1Q99990 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC10.76□□□□□ -0.69
VGLL1Q99990 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
VGLL1Q99990 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VGLL1Q99990 GRAP-202ENST00000395635 834 ntTSL 2 BASIC10.76□□□□□ -0.69
VGLL1Q99990 AC010141.1-201ENST00000411585 623 ntBASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms