Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.59□□□□□ -0.39
VRK1Q99986 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.59□□□□□ -0.39
VRK1Q99986 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VRK1Q99986 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
VRK1Q99986 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
VRK1Q99986 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
VRK1Q99986 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VRK1Q99986 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VRK1Q99986 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.59□□□□□ -0.39
VRK1Q99986 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VRK1Q99986 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VRK1Q99986 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
VRK1Q99986 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VRK1Q99986 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VRK1Q99986 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.59□□□□□ -0.39
VRK1Q99986 KC6-207ENST00000600644 2311 ntTSL 3 BASIC12.59□□□□□ -0.39
VRK1Q99986 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VRK1Q99986 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
VRK1Q99986 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.59□□□□□ -0.39
VRK1Q99986 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
VRK1Q99986 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
VRK1Q99986 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
VRK1Q99986 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
VRK1Q99986 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.58□□□□□ -0.39
VRK1Q99986 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
VRK1Q99986 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
VRK1Q99986 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.39
VRK1Q99986 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.58□□□□□ -0.39
VRK1Q99986 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
VRK1Q99986 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
VRK1Q99986 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 FAM90A12P-201ENST00000519497 2375 ntBASIC12.58□□□□□ -0.4
VRK1Q99986 FAM90A24P-201ENST00000520792 2369 ntBASIC12.58□□□□□ -0.4
VRK1Q99986 MIR497HG-202ENST00000572453 3838 ntBASIC12.58□□□□□ -0.4
VRK1Q99986 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.58□□□□□ -0.4
VRK1Q99986 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC12.58□□□□□ -0.4
VRK1Q99986 TCAM1P-207ENST00000485295 1537 ntBASIC12.58□□□□□ -0.4
VRK1Q99986 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.58□□□□□ -0.4
VRK1Q99986 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
VRK1Q99986 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
VRK1Q99986 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.58□□□□□ -0.4
VRK1Q99986 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 DPM3-202ENST00000368399 517 ntBASIC12.58□□□□□ -0.4
VRK1Q99986 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
VRK1Q99986 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.58□□□□□ -0.4
VRK1Q99986 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.58□□□□□ -0.4
VRK1Q99986 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.58□□□□□ -0.4
VRK1Q99986 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 AC010141.1-201ENST00000411585 623 ntBASIC12.58□□□□□ -0.4
VRK1Q99986 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC12.58□□□□□ -0.4
VRK1Q99986 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC12.58□□□□□ -0.4
VRK1Q99986 AC012441.2-201ENST00000444843 739 ntBASIC12.58□□□□□ -0.4
VRK1Q99986 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.58□□□□□ -0.4
VRK1Q99986 RPL18P13-201ENST00000478088 569 ntBASIC12.58□□□□□ -0.4
VRK1Q99986 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.58□□□□□ -0.4
VRK1Q99986 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.58□□□□□ -0.4
VRK1Q99986 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.58□□□□□ -0.4
VRK1Q99986 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.58□□□□□ -0.4
VRK1Q99986 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.58□□□□□ -0.4
VRK1Q99986 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.58□□□□□ -0.4
VRK1Q99986 SYT17-208ENST00000568433 812 ntTSL 3 BASIC12.58□□□□□ -0.4
VRK1Q99986 AC009884.2-201ENST00000603110 324 ntBASIC12.58□□□□□ -0.4
VRK1Q99986 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC12.58□□□□□ -0.4
VRK1Q99986 AC090164.2-201ENST00000611487 516 ntBASIC12.58□□□□□ -0.4
VRK1Q99986 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.58□□□□□ -0.4
VRK1Q99986 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
VRK1Q99986 AC022748.3-201ENST00000621828 275 ntBASIC12.58□□□□□ -0.4
VRK1Q99986 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
VRK1Q99986 AC027601.3-201ENST00000622907 509 ntBASIC12.58□□□□□ -0.4
VRK1Q99986 CU633904.3-201ENST00000624042 1029 ntBASIC12.58□□□□□ -0.4
VRK1Q99986 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.58□□□□□ -0.4
VRK1Q99986 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.58□□□□□ -0.4
VRK1Q99986 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
VRK1Q99986 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
VRK1Q99986 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 AL008718.2-201ENST00000609206 1313 ntBASIC12.58□□□□□ -0.4
VRK1Q99986 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VRK1Q99986 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms