Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 RN7SL665P-201ENST00000578793 300 ntBASIC12.37□□□□□ -0.43
TMEM54Q969K7 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 AL358781.1-202ENST00000321081 1360 ntBASIC12.37□□□□□ -0.43
TMEM54Q969K7 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM54Q969K7 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM54Q969K7 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM54Q969K7 AGAP12P-201ENST00000585227 2359 ntBASIC12.37□□□□□ -0.43
TMEM54Q969K7 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM54Q969K7 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM54Q969K7 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM54Q969K7 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TMEM54Q969K7 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
TMEM54Q969K7 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
TMEM54Q969K7 AC073869.1-201ENST00000415574 2762 ntBASIC12.36□□□□□ -0.43
TMEM54Q969K7 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
TMEM54Q969K7 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.36□□□□□ -0.43
TMEM54Q969K7 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 OR2K2-202ENST00000374428 1038 ntBASIC12.36□□□□□ -0.43
TMEM54Q969K7 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 MIR557-201ENST00000385239 98 ntBASIC12.36□□□□□ -0.43
TMEM54Q969K7 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
TMEM54Q969K7 AC098934.1-203ENST00000442868 1262 ntBASIC12.36□□□□□ -0.43
TMEM54Q969K7 AP000358.1-201ENST00000456260 156 ntBASIC12.36□□□□□ -0.43
TMEM54Q969K7 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 RPL18AP8-201ENST00000486071 528 ntBASIC12.36□□□□□ -0.43
TMEM54Q969K7 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC12.36□□□□□ -0.43
TMEM54Q969K7 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
TMEM54Q969K7 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC12.36□□□□□ -0.43
TMEM54Q969K7 RTN3P1-201ENST00000536295 711 ntBASIC12.36□□□□□ -0.43
TMEM54Q969K7 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 AC132825.4-202ENST00000578792 434 ntBASIC12.36□□□□□ -0.43
TMEM54Q969K7 RN7SL574P-201ENST00000581512 297 ntBASIC12.36□□□□□ -0.43
TMEM54Q969K7 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC12.36□□□□□ -0.43
TMEM54Q969K7 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.36□□□□□ -0.43
TMEM54Q969K7 AL356740.1-201ENST00000602192 1297 ntBASIC12.36□□□□□ -0.43
TMEM54Q969K7 AF254983.2-201ENST00000612331 135 ntBASIC12.36□□□□□ -0.43
TMEM54Q969K7 AC009560.1-201ENST00000620208 434 ntBASIC12.36□□□□□ -0.43
TMEM54Q969K7 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC12.36□□□□□ -0.43
TMEM54Q969K7 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC12.36□□□□□ -0.43
TMEM54Q969K7 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
TMEM54Q969K7 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.36□□□□□ -0.43
TMEM54Q969K7 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.36□□□□□ -0.43
TMEM54Q969K7 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.36□□□□□ -0.43
TMEM54Q969K7 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.36□□□□□ -0.43
TMEM54Q969K7 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
TMEM54Q969K7 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
TMEM54Q969K7 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 AC108024.1-201ENST00000626286 1721 ntBASIC12.36□□□□□ -0.43
TMEM54Q969K7 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.36□□□□□ -0.43
TMEM54Q969K7 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 AC138761.6-201ENST00000583997 1423 ntBASIC12.36□□□□□ -0.43
TMEM54Q969K7 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.36□□□□□ -0.43
TMEM54Q969K7 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TMEM54Q969K7 Z98885.3-201ENST00000624882 1757 ntBASIC12.35□□□□□ -0.43
TMEM54Q969K7 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TMEM54Q969K7 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TMEM54Q969K7 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
TMEM54Q969K7 AF013593.1-201ENST00000458074 1487 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms