Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.4□□□□□ -0.26
TM9SF4Q92544 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TM9SF4Q92544 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TM9SF4Q92544 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TM9SF4Q92544 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TM9SF4Q92544 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TM9SF4Q92544 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TM9SF4Q92544 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TM9SF4Q92544 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TM9SF4Q92544 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
TM9SF4Q92544 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.4□□□□□ -0.27
TM9SF4Q92544 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.4□□□□□ -0.27
TM9SF4Q92544 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TM9SF4Q92544 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TM9SF4Q92544 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TM9SF4Q92544 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TM9SF4Q92544 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TM9SF4Q92544 OR2K2-202ENST00000374428 1038 ntBASIC13.39□□□□□ -0.27
TM9SF4Q92544 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TM9SF4Q92544 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TM9SF4Q92544 AC114947.1-202ENST00000514136 344 ntBASIC13.39□□□□□ -0.27
TM9SF4Q92544 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TM9SF4Q92544 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TM9SF4Q92544 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 AC007326.1-201ENST00000604539 458 ntBASIC13.39□□□□□ -0.27
TM9SF4Q92544 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TM9SF4Q92544 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TM9SF4Q92544 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TM9SF4Q92544 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TM9SF4Q92544 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TM9SF4Q92544 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TM9SF4Q92544 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TM9SF4Q92544 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TM9SF4Q92544 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TM9SF4Q92544 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TM9SF4Q92544 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TM9SF4Q92544 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TM9SF4Q92544 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TM9SF4Q92544 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.38□□□□□ -0.27
TM9SF4Q92544 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 AC015909.3-201ENST00000572855 1794 ntBASIC13.38□□□□□ -0.27
TM9SF4Q92544 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC13.38□□□□□ -0.27
TM9SF4Q92544 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TM9SF4Q92544 BANF1P3-201ENST00000412556 261 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms