Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CHMP7Q8WUX9 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC22.14■■□□□ 1.14
CHMP7Q8WUX9 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
CHMP7Q8WUX9 AC034205.3-201ENST00000603595 1376 ntBASIC22.14■■□□□ 1.14
CHMP7Q8WUX9 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CHMP7Q8WUX9 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CHMP7Q8WUX9 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 SERF2-204ENST00000402131 586 ntTSL 2 BASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 FTLP3-201ENST00000427242 528 ntBASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 RN7SL789P-201ENST00000478944 293 ntBASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 FTH1-205ENST00000529631 507 ntTSL 4 BASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 FOS-205ENST00000555242 629 ntTSL 2 BASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 RCC2P1-201ENST00000452257 1476 ntBASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 TBC1D3P1-201ENST00000590047 1693 ntBASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHMP7Q8WUX9 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 POLR3DP1-201ENST00000398689 1176 ntBASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 CLK2P1-201ENST00000416636 1294 ntBASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 HMGN1P4-201ENST00000419500 290 ntBASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 DDX11L8-201ENST00000535849 366 ntBASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 AC073592.10-201ENST00000624789 597 ntBASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 CA6-205ENST00000480186 1493 ntTSL 2 BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHMP7Q8WUX9 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 AC099552.4-201ENST00000624248 949 ntBASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 TCAF2P1-201ENST00000291129 2421 ntBASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 USP35-204ENST00000530267 2419 ntTSL 2 BASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC22.12■■□□□ 1.13
CHMP7Q8WUX9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms